RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SBSNQ6UWP8 590 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 Q6ZVL8 140 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 PHYKPLQ8IUZ5 450 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ZBTB2Q8N680 514 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 NR1H4Q96RI1 486 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 ALG2Q9H553 416 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 SDR39U1Q9NRG7 319 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 GID8Q9NWU2 228 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 COMMD8Q9NX08 183 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 KIAA1522Q9P206 1035 aaPredicted RBP11.56□□□□□ -0.56
PDE6C-201ENST00000371447 B4GALT6Q9UBX8 382 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 GPR45Q9Y5Y3 372 aa11.56□□□□□ -0.56
PDE6C-201ENST00000371447 PATJQ8NI35 1801 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PABPN1LA6NDY0 278 aaKnown RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 FXYD1O00168 92 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PLK4O00444 970 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 SOCS2O14508 198 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 CXCL10P02778 98 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GNAO1P09471 354 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 HOXB8P17481 243 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 LHCGRP22888 699 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GSK3BP49841 420 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GTDC1Q4AE62 458 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 LY6G5CQ5SRR4 150 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TRIM74Q86UV6 250 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TRIM73Q86UV7 250 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TCEAL8Q8IYN2 117 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 FBXO30Q8TB52 745 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 EFHD1Q9BUP0 239 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 WRAP53Q9BUR4 548 aaKnown RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 Q9H521 79 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 RIC8BQ9NVN3 520 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TMEM181Q9P2C4 612 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GNPTGQ9UJJ9 305 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ZNF490Q9ULM2 529 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ITM2BQ9Y287 266 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PRSS51A0A1B0GVH4 220 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ANTXRLA6NF34 631 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GAPDHSO14556 408 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 OR7A17O14581 309 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ARPC2O15144 300 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GREM1O60565 184 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 CLPTM1O96005 669 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 FGF4P08620 206 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 LAG3P18627 525 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 AP1S1P61966 158 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 FAM174BQ3ZCQ3 159 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 C1QTNF12Q5T7M4 302 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 BLOC1S3Q6QNY0 202 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 SNX20Q7Z614 316 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ADGRG6Q86SQ4 1221 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 VRK3Q8IV63 474 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PHACTR4Q8IZ21 702 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 LILRA3Q8N6C8 439 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 C12orf76Q8N812 135 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TMEM102Q8N9M5 508 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 OR2T34Q8NGX1 318 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 OR2T3Q8NH03 318 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 COPS8Q99627 209 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 CENPKQ9BS16 269 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 MAGEE1Q9HCI5 957 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 MAGED1Q9Y5V3 778 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 REV3LO60673 3130 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ASPDHA6ND91 283 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TTC34A8MYJ7 566 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 LIN7AO14910 233 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 SLC22A2O15244 555 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 SYN1P17600 705 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 SPAM1P38567 509 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 RPIAP49247 311 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 OR4D2P58180 307 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 GSTA3Q16772 222 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PGS1Q32NB8 556 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 MPPE1Q53F39 396 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 NANOGP8Q6NSW7 305 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 HMBOX1Q6NT76 420 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 ADAMTSL2Q86TH1 951 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 KIAA2013Q8IYS2 634 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 C2orf73Q8N5S3 287 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PROKR1Q8TCW9 393 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 MAGEE2Q8TD90 523 aaPredicted RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 OVCA2Q8WZ82 227 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PEX13Q92968 403 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 NCLNQ969V3 563 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 EBPLQ9BY08 206 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 NANOGQ9H9S0 305 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PAPOLBQ9NRJ5 636 aaKnown RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PDP2Q9P2J9 529 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
PDE6C-201ENST00000371447 OAZ3Q9UMX2 235 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 PIKFYVEQ9Y2I7 2098 aa11.55□□□□□ -0.56
PDE6C-201ENST00000371447 TAPBPO15533 448 aa11.54□□□□□ -0.56
PDE6C-201ENST00000371447 ULK1O75385 1050 aa11.54□□□□□ -0.56
PDE6C-201ENST00000371447 ZNF23P17027 643 aa11.54□□□□□ -0.56
PDE6C-201ENST00000371447 ETV3P41162 512 aa11.54□□□□□ -0.56
PDE6C-201ENST00000371447 CASP9P55211 416 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms