RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PLCL1Q15111 1095 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 TAF1AQ15573 450 aaPredicted RBP12.83□□□□□ -0.36
RPF1-201ENST00000370654 DNTTIP2Q5QJE6 756 aaKnown RBP12.83□□□□□ -0.36
RPF1-201ENST00000370654 ANKRD20A2Q5SQ80 823 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 ANKRD20A1Q5TYW2 823 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 ANKRD20A3Q5VUR7 823 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 CAPRIN2Q6IMN6 1127 aaKnown RBP12.83□□□□□ -0.36
RPF1-201ENST00000370654 D2HGDHQ8N465 521 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 OR2L2Q8NH16 312 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 UBXN4Q92575 508 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 ALG3Q92685 438 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 RBM41Q96IZ5 413 aaKnown RBP12.83□□□□□ -0.36
RPF1-201ENST00000370654 ZCCHC2Q9C0B9 1178 aaKnown RBP12.83□□□□□ -0.36
RPF1-201ENST00000370654 TWSG1Q9GZX9 223 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 ACTL8Q9H568 366 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 FGF21Q9NSA1 209 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 HRASLS2Q9NWW9 162 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 RARRES3Q9UL19 164 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 PCDHGA6Q9Y5G7 932 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 DOPEY2Q9Y3R5 2298 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 PCSK5Q92824 1860 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 AGAP14A8MT82 685 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 PJA2O43164 708 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 SPTBP11277 2137 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
RPF1-201ENST00000370654 CTNNA1P35221 906 aaKnown RBP12.82□□□□□ -0.36
RPF1-201ENST00000370654 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
RPF1-201ENST00000370654 MLLT10P55197 1068 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 CHAF1BQ13112 559 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 GPS2Q13227 327 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 IL10RAQ13651 578 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 ZNF658BQ4V348 819 aaPredicted RBP12.82□□□□□ -0.36
RPF1-201ENST00000370654 BCL7AQ4VC05 210 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 CPZQ66K79 652 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 CFAP206Q8IYR0 622 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 OR4E2Q8NGC2 313 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 ZNF501Q96CX3 271 aaPredicted RBP12.82□□□□□ -0.36
RPF1-201ENST00000370654 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
RPF1-201ENST00000370654 LACRTQ9GZZ8 138 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 KIR3DX1Q9H7L2 352 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 PDE7BQ9NP56 450 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■■■■□ 19.3
RPF1-201ENST00000370654 POLHQ9Y253 713 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 PCDHB3Q9Y5E6 796 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 PCDHA3Q9Y5H8 950 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
RPF1-201ENST00000370654 A0A0U1RQJ8 604 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 UBA6A0AVT1 1052 aaPredicted RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 CLEC18AA5D8T8 446 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 TLCD2A6NGC4 264 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 KCNN4O15554 427 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 LDB2O43679 373 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 ANXA9O76027 345 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 CCNYL3P0C7X3 344 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 RBP3P10745 1247 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PYGMP11217 842 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 TPH1P17752 444 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PDHA2P29803 388 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 EIF3EP60228 445 aaKnown RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 HSD11B2P80365 405 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 ABRQ12979 859 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 SARM1Q6SZW1 724 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 CLEC18BQ6UXF7 455 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 CLEC18CQ8NCF0 446 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PHC3Q8NDX5 983 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 LINC00615Q96LM1 132 aaPredicted RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 OSBPL8Q9BZF1 889 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PIH1D1Q9NWS0 290 aaKnown RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 MED13Q9UHV7 2174 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 C5orf60A6NFR6 353 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 SLC9B1P1A6NJY1 282 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 C2orf81A6NN90 581 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 BTN3A3O00478 584 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PTMSP20962 102 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 PRLHRP49683 370 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PMS2P54278 862 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 TUBB4BP68371 445 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 ACY1Q03154 408 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 KLRB1Q12918 225 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 SEMA5AQ13591 1074 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 TUBB2AQ13885 445 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 SEPT6Q14141 434 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 ZNF789Q5FWF6 425 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 CCDC181Q5TID7 509 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 TCTN3Q6NUS6 607 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 DARS2Q6PI48 645 aaKnown RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 OOSP2Q86WS3 158 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 NXPE1Q8N323 547 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
RPF1-201ENST00000370654 DNAJC1Q96KC8 554 aaKnown RBP12.81□□□□□ -0.36
RPF1-201ENST00000370654 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms