RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 NIPSNAP2O75323 286 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 VPS26AO75436 327 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 SLC35G4P0C7Q5 338 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 CKMT1AP12532 417 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 AOAHP28039 575 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 SKIV2L2P42285 1042 aaKnown RBP15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 BOP1Q14137 746 aaKnown RBP15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 NR0B2Q15466 257 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 KLHL38Q2WGJ6 581 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 C14orf28Q4W4Y0 310 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 PLEKHS1Q5SXH7 462 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 GRTP1Q5TC63 336 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 FAM45BPQ6NSW5 357 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 ZC3HC1Q86WB0 502 aaKnown RBP15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 KRT222Q8N1A0 295 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 SFRP1Q8N474 314 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 FAM45AQ8TCE6 357 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 CNDP2Q96KP4 475 aaKnown RBP15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 RTKNQ9BST9 563 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 MCMBPQ9BTE3 642 aa15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 STN1Q9H668 368 aaKnown RBP15.23■□□□□ 0.03
PRPF38B-202ENST00000370022 GVINP1Q7Z2Y8 2422 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 CFAP54Q96N23 3096 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 SLC5A10A0PJK1 596 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 TNFSF14O43557 240 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 GPC4O75487 556 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 CKMT2P17540 419 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 RPL10P27635 214 aaKnown RBP15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 SEPT7Q16181 437 aaKnown RBP15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 RSPO4Q2I0M5 234 aaPredicted RBP15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 XKR5Q6UX68 686 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 GLRX5Q86SX6 157 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 SLC9B2Q86UD5 537 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 SLC35F3Q8IY50 421 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 CNPY4Q8N129 248 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 PPM1NQ8N819 430 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 KYQ8NBH2 561 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 MAPK15Q8TD08 544 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 LKAAEAR1Q8TD35 194 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 AENQ8WTP8 325 aaKnown RBP15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 NAT6Q93015 286 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 RBBP8Q99708 897 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 TAS2R13Q9NYV9 303 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 SIRPGQ9P1W8 387 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 FAM8A1Q9UBU6 413 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 TDRD6O60522 2096 aaKnown RBP15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 CABIN1Q9Y6J0 2220 aa15.22■□□□□ 0.03
PRPF38B-202ENST00000370022 IFRD1O00458 451 aaPredicted RBP15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 NUDT21O43809 227 aaKnown RBP15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 SLCO2B1O94956 709 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 EML2O95834 649 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 CEACAM1P13688 526 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 BRAFP15056 766 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 GLB1P16278 677 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 ITGB6P18564 788 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 XRCC1P18887 633 aaPredicted RBP15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 ATP5DP30049 168 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 SPRP35270 261 aaPredicted RBP15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 FASLGP48023 281 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 CLCN7P51798 805 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 DAB2P98082 770 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 HSPA14Q0VDF9 509 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 MAP9Q49MG5 647 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 SLC22A15Q8IZD6 547 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 ZBTB2Q8N680 514 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 CAVIN3Q969G5 261 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 CAMK1GQ96NX5 476 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 NDNQ99608 321 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 WWP1Q9H0M0 922 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 OR52A5Q9H2C5 316 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 POT1Q9NUX5 634 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 PADI4Q9UM07 663 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 WDR37Q9Y2I8 494 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 MED16Q9Y2X0 877 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 VWA7Q9Y334 891 aa15.21■□□□□ 0.03
PRPF38B-202ENST00000370022 LAMA1P25391 3075 aa15.21■□□□□ 0.02
PRPF38B-202ENST00000370022 EME2A4GXA9 379 aaPredicted RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 EIF3FO00303 357 aaPredicted RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 PIAS1O75925 651 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 PNLIPP16233 465 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 ACP1P24666 158 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 PREPP48147 710 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 LIMK2P53671 638 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 BIRC2Q13490 618 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC29A2Q14542 456 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 TRIP6Q15654 476 aaKnown RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 UBAP2Q5T6F2 1119 aaKnown RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 HECTD2Q5U5R9 776 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 CAPRIN2Q6IMN6 1127 aaKnown RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 PDZD3Q86UT5 571 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 RBM12BQ8IXT5 1001 aaKnown RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 ARL14Q8N4G2 192 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 LILRA3Q8N6C8 439 aaPredicted RBP15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC37A2Q8TED4 501 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 INPP5DQ92835 1189 aa15.2■□□□□ 0.02
PRPF38B-202ENST00000370022 SH3KBP1Q96B97 665 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms