RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PEX5LQ8IYB4 626 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 UGT1A7Q9HAW7 530 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 UGT1A10Q9HAW8 530 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 UGT1A8Q9HAW9 530 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 OR6C75A6NL08 312 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 SCGB1D2O95969 90 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 KIR3DL1P43629 444 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 GDI2P50395 445 aaKnown RBP17.94■□□□□ 0.46
SNX27-202ENST00000368841 BBS12Q6ZW61 710 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 OR6K6Q8NGW6 343 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 CLPXO76031 633 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 TUSC3Q13454 348 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 BRMS1LQ5PSV4 323 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 MTERF1Q99551 399 aaKnown RBP17.94■□□□□ 0.46
SNX27-202ENST00000368841 NMUR2Q9GZQ4 415 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 CAP1Q01518 475 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 FUT10Q6P4F1 479 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 B3GNT4Q9C0J1 378 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 LOC100509620A0A075B734 347 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 PPP1R11O60927 126 aaPredicted RBP17.94■□□□□ 0.46
SNX27-202ENST00000368841 INTS6LQ5JSJ4 861 aaKnown RBP17.94■□□□□ 0.46
SNX27-202ENST00000368841 SPATC1Q76KD6 591 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 TAC4Q86UU9 113 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 AMIGO1Q86WK6 493 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 ACSS3Q9H6R3 686 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 CDH7Q9ULB5 785 aa17.94■□□□□ 0.46
SNX27-202ENST00000368841 NCBP2P52298 156 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX27-202ENST00000368841 RAB2AP61019 212 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 KLF10Q13118 480 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ZNF567Q8N184 647 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 LPGAT1Q92604 370 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 S100A14Q9HCY8 104 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PLLPQ9Y342 182 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 FADS3Q9Y5Q0 445 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ELOVL7A1L3X0 281 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 CSKP41240 450 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 NR1H2P55055 460 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ATP13A5Q4VNC0 1218 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 TOR1AIP1Q5JTV8 583 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PHF19Q5T6S3 580 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 RHOJQ9H4E5 214 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 MRPS30Q9NP92 439 aaKnown RBP17.93■□□□□ 0.46
SNX27-202ENST00000368841 C12orf4Q9NQ89 552 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 GMEB2Q9UKD1 530 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 A0A1W2PQ72 361 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PRKCIP41743 596 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ARSIQ5FYB1 569 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 TNFRSF25Q93038 417 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PLGP00747 810 aaPredicted RBP17.93■□□□□ 0.46
SNX27-202ENST00000368841 ABHD2P08910 425 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 LAG3P18627 525 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 CBLP22681 906 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 KELP23276 732 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PDX1P52945 283 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 DNASE1L3Q13609 305 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ZACNQ401N2 412 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PPP1R15BQ5SWA1 713 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ZZZ3Q8IYH5 903 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ZNF611Q8N823 705 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 GPR151Q8TDV0 419 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 RBM18Q96H35 190 aaKnown RBP17.93■□□□□ 0.46
SNX27-202ENST00000368841 GORASP1Q9BQQ3 440 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 IFT27Q9BW83 186 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 SLC38A8A6NNN8 435 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PTGES3Q15185 160 aaKnown RBP17.93■□□□□ 0.46
SNX27-202ENST00000368841 RNF220Q5VTB9 566 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 SCAMP5Q8TAC9 235 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ZSCAN5BA6NJL1 495 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PRMT5O14744 637 aaPredicted RBP17.93■□□□□ 0.46
SNX27-202ENST00000368841 INSIG1O15503 277 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 NFATC1O95644 943 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 CRHR1P34998 444 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PPP3R1P63098 170 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 PLGLB1Q02325 96 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 RALGPS1Q5JS13 557 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 ENPP7Q6UWV6 458 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 COX18Q8N8Q8 333 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 OR2T34Q8NGX1 318 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 OR2T3Q8NH03 318 aa17.93■□□□□ 0.46
SNX27-202ENST00000368841 GNEQ9Y223 722 aaKnown RBP17.93■□□□□ 0.46
SNX27-202ENST00000368841 TULP3O75386 442 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ALPIP09923 528 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 PGAM2P15259 253 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 OR2AJ1Q8NGZ0 328 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 S100ZQ8WXG8 99 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 TVP23BQ9NYZ1 205 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 SGCBQ16585 318 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 LRRC38Q5VT99 294 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ZCCHC12Q6PEW1 402 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 SLC26A9Q7LBE3 791 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ANKFN1Q8N957 763 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 SMIM35A0A1B0GVV1 85 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 TRIM64A6NGJ6 449 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 RGS10O43665 173 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 NME6O75414 186 aaPredicted RBP17.92■□□□□ 0.46
SNX27-202ENST00000368841 TBX18O95935 607 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 CCNE2O96020 404 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 ZYG11AQ6WRX3 759 aa17.92■□□□□ 0.46
SNX27-202ENST00000368841 METTL3Q86U44 580 aaKnown RBP17.92■□□□□ 0.46
SNX27-202ENST00000368841 SPERTQ8NA61 448 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms