RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 PRKACGP22612 351 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 LIPAP38571 399 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 HNF4AP41235 474 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 UFM1P61960 85 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 NKG7Q16617 165 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 GPAT3Q53EU6 434 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 KIAA0930Q6ICG6 404 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 CCDC190Q86UF4 302 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ANKRD49Q8WVL7 239 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 SLC7A6Q92536 515 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 GTF2H4Q92759 462 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 SNAPC3Q92966 411 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 PEX13Q92968 403 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 PRMT6Q96LA8 375 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 C12orf42Q96LP6 360 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 OR2A14Q96R47 310 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 SDHCQ99643 169 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 NARFLQ9H6Q4 476 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ZIM2Q9NZV7 527 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 BTRCQ9Y297 605 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ANKRD12Q6UB98 2062 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ARHGAP33O14559 1287 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 USP2O75604 605 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 RAD17O75943 681 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 STAU1O95793 577 aaKnown RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ERCC2P18074 760 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 IGFBP5P24593 272 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 PTGS2P35354 604 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 C5orf22Q49AR2 442 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 INTS6LQ5JSJ4 861 aaKnown RBP17.68■□□□□ 0.42
CHTOP-201ENST00000368686 LAIR1Q6GTX8 287 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ISCA2Q86U28 154 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 KLHDC8BQ8IXV7 354 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ZFAND1Q8TCF1 268 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 TBL1YQ9BQ87 522 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 ENTPD7Q9NQZ7 604 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 TMPRSS4Q9NRS4 437 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 LIMD1Q9UGP4 676 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 INVSQ9Y283 1065 aa17.68■□□□□ 0.42
CHTOP-201ENST00000368686 A0A0G2JMZ2 1700 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 OR5K3A6NET4 321 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 GSTA4O15217 222 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 ARHGEF9O43307 516 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 NOS1APO75052 506 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 RPLP0P05388 317 aaKnown RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 CAPN1P07384 714 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 EFNA1P20827 205 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 GADD45AP24522 165 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 ERP29P30040 261 aaKnown RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 SYT16Q17RD7 645 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 XKRXQ6PP77 449 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 ARHGAP36Q6ZRI8 547 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 ZNF767PQ75MW2 155 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 TMEM179BQ7Z7N9 219 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 KCNA7Q96RP8 456 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 AAR2Q9Y312 384 aaKnown RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 COL1A2P08123 1366 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 INO80B-WBP1J3KQ70 363 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 HOXD10P28358 340 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 KCNC1P48547 511 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 SERPINH1P50454 418 aaKnown RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 MTPNP58546 118 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 CTAG1AP78358 180 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 RBP5P82980 135 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 PLCZ1Q86YW0 608 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 LIX1LQ8IVB5 337 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 PAF1Q8N7H5 531 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 PTGR2Q8N8N7 351 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 NEDD4LQ96PU5 975 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 SIGLEC11Q96RL6 698 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 RHNO1Q9BSD3 238 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 RANGRFQ9HD47 186 aaPredicted RBP17.67■□□□□ 0.42
CHTOP-201ENST00000368686 TREX1Q9NSU2 369 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 C14orf119Q9NWQ9 140 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 SLC2A6Q9UGQ3 507 aa17.67■□□□□ 0.42
CHTOP-201ENST00000368686 PPP6CO00743 305 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 CPNE3O75131 537 aaKnown RBP17.66■□□□□ 0.42
CHTOP-201ENST00000368686 GBX1Q14549 363 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 PCSK7Q16549 785 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 HECTD2Q5U5R9 776 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 FAM205BPQ63HN1 556 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 DLEU7Q6UYE1 221 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 LRRC8DQ7L1W4 858 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 DEFB106AQ8N104 65 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 FLCNQ8NFG4 579 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ITCHQ96J02 903 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 PPM1MQ96MI6 270 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ROGDIQ9GZN7 287 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ASB7Q9H672 318 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ACAD9Q9H845 621 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ADGRE2Q9UHX3 823 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 GMPPBQ9Y5P6 360 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 SCN9AQ15858 1988 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 SHROOM3Q8TF72 1996 aa17.66■□□□□ 0.42
CHTOP-201ENST00000368686 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
CHTOP-201ENST00000368686 IGKV6D-21A0A0A0MT36 114 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms