RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ADAM15Q13444 863 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 COL19A1Q14993 1142 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 CHRNA6Q15825 494 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 FUT11Q495W5 492 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 LPCAT4Q643R3 524 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 CRTC1Q6UUV9 634 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 GOLGA7Q7Z5G4 137 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 DHFR2Q86XF0 187 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 TCAIMQ8N3R3 496 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 METTL6Q8TCB7 284 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 SPDL1Q96EA4 605 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 PPP3R2Q96LZ3 170 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 COPS8Q99627 209 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 NOL11Q9H8H0 719 aaKnown RBP13.79□□□□□ -0.2
USF1-202ENST00000368020 HEBP1Q9NRV9 189 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 TDP1Q9NUW8 608 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 PKD2L2Q9NZM6 624 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 OPTCQ9UBM4 332 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 LEF1Q9UJU2 399 aaPredicted RBP13.79□□□□□ -0.2
USF1-202ENST00000368020 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 ANGPTL3Q9Y5C1 460 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 MTCH2Q9Y6C9 303 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 PRORSD1PA6NEY8 169 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 AQP12BA6NM10 295 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 IQCF5A8MTL0 148 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 SOX1O00570 391 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 ZNF197O14709 1029 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 DNAJA2O60884 412 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 KATNA1O75449 491 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 OR4F21O95013 312 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 TRIM16O95361 564 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 HMOX2P30519 316 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 NNMTP40261 264 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 CCNHP51946 323 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 EMX2Q04743 252 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 PRKG2Q13237 762 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 PTPRRQ15256 657 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 LRRC66Q68CR7 880 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 AQP12AQ8IXF9 295 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 AHI1Q8N157 1196 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 RNF148Q8N7C7 305 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 MAGEB10Q96LZ2 347 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 BBS2Q9BXC9 721 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 SMOXQ9NWM0 555 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 ZNF225Q9UK10 706 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 CLEC4EQ9ULY5 219 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 TIMM22Q9Y584 194 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 ST14Q9Y5Y6 855 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 IGLV3-16A0A075B6K0 115 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 PABPN1LA6NDY0 278 aaKnown RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 CCDC154A6NI56 674 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 QSOX1O00391 747 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 DENRO43583 198 aaKnown RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 C8GP07360 202 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 RHOP08100 348 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 PIM1P11309 404 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 CAPN3P20807 821 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 ARL1P40616 181 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 AQP4P55087 323 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 DCDC1P59894 354 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 CDKL1Q00532 357 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 SP140Q13342 867 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 INPP5AQ14642 412 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 VPS26BQ4G0F5 336 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 AASDHQ4L235 1098 aaPredicted RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 SFT2D3Q587I9 215 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 C6orf136Q5SQH8 315 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 MILR1Q7Z6M3 343 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 CDYL2Q8N8U2 506 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 FNDC5Q8NAU1 212 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 OR2T34Q8NGX1 318 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 OR2T3Q8NH03 318 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 SMG7Q92540 1137 aaKnown RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 IRF7Q92985 503 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 LRRC58Q96CX6 371 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 DCUN1D1Q96GG9 259 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 RPL10LQ96L21 214 aaKnown RBP13.78□□□□□ -0.2
USF1-202ENST00000368020 EGFL8Q99944 293 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 CD244Q9BZW8 370 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 EBF3Q9H4W6 596 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 IGFLR1Q9H665 355 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 IPPKQ9H8X2 491 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 MARK1Q9P0L2 795 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 DLGAP2Q9P1A6 1054 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 PACSIN3Q9UKS6 424 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 PTGDR2Q9Y5Y4 395 aa13.78□□□□□ -0.2
USF1-202ENST00000368020 CDH23Q9H251 3354 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms