RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 I3L521 148 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ERVK-8P63133 956 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ECT2LQ008S8 904 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 DSC2Q02487 901 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 DLG2Q15700 870 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PM20D2Q8IYS1 436 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PLD6Q8N2A8 252 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 LINC01465Q8N7H1 131 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 NPLOC4Q8TAT6 608 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 NSMCE3Q96MG7 304 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ERMAPQ96PL5 475 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TRIB3Q96RU7 358 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 LPIN3Q9BQK8 851 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZSCAN5AQ9BUG6 496 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 COQ10BQ9H8M1 238 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 MAGEE1Q9HCI5 957 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 GPN1Q9HCN4 374 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 HMX1Q9NP08 348 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 LMCD1Q9NZU5 365 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 SSC5DA1L4H1 1573 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZCWPW2A0A1B0GU75 182 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ISPDA4D126 451 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 HMGB3O15347 200 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PRKD3O94806 890 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 CPSF4O95639 269 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 HLA-DQB2P05538 268 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 FYNP06241 537 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 HNF4AP41235 474 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 RPL34P49207 117 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PNLIPRP1P54315 467 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 GALNT3Q14435 633 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PLET1Q6UQ28 207 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 MRPL10Q7Z7H8 261 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 GALNT7Q86SF2 657 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 SMYD1Q8NB12 490 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 DNAJB14Q8TBM8 379 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ARNTL2Q8WYA1 636 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 GATA6Q92908 595 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TIFAQ96CG3 184 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TMEM209Q96SK2 561 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TMEM175Q9BSA9 504 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 SLITRK2Q9H156 845 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 NMRK2Q9NPI5 230 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 SMPD3Q9NY59 655 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 DPP7Q9UHL4 492 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 G3V2T6 193 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 SCELO95171 688 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 FTH1P02794 183 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 LINGO3P0C6S8 592 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PRPS2P11908 318 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ARF5P84085 180 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TAF10Q12962 218 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 CTC1Q2NKJ3 1217 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PLEKHG4Q58EX7 1191 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ALKAL1Q6UXT8 129 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 AKAP1Q92667 903 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 FATE1Q969F0 183 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 FAM129BQ96TA1 746 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 DERL2Q9GZP9 239 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF395Q9H8N7 513 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 MRPL17Q9NRX2 175 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PHF11Q9UIL8 331 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 LY75O60449 1722 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 MGAT4DA6NG13 374 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TRIM64A6NGJ6 449 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TRIM64BA6NI03 449 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF879B4DU55 563 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 MAFKO60675 156 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 CNTN1Q12860 1018 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 XKR4Q5GH76 650 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZCCHC8Q6NZY4 707 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 GPR180Q86V85 440 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 TRPV1Q8NER1 839 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF671Q8TAW3 534 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 LRTOMTQ8WZ04 291 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 CMTM6Q9NX76 183 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 IFT80Q9P2H3 777 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 PACSIN3Q9UKS6 424 aa5.3□□□□□ -1.56
CDC42BPA-204ENST00000366767 ATP6AP2A0A1C7CYW4 349 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 CPNE3O75131 537 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 ATP6AP2O75787 350 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 PGK1P00558 417 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 SERPINA1P01009 418 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 IFNA7P01567 189 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 HALP42357 657 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 RPS9P46781 194 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 BTN3A2P78410 334 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 RING1Q06587 406 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 PPM1LQ5SGD2 360 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 VARS2Q5ST30 1063 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF613Q6PF04 617 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 SELENOMQ8WWX9 145 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 PSMG2Q969U7 264 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 RDH12Q96NR8 316 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZCCHC2Q9C0B9 1178 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 MEAF6Q9HAF1 191 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 MTMR10Q9NXD2 777 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 TOR4AQ9NXH8 423 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 KIAA1522Q9P206 1035 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 SSR3Q9UNL2 185 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms