RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 FOXM1Q08050 763 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 LY6DQ14210 128 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 MAP7Q14244 749 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 PLCL1Q15111 1095 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 SKIDA1Q1XH10 827 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 FAM92BQ6ZTR7 304 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 SERPINA9Q86WD7 417 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 C1orf54Q8WWF1 131 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 UBXN4Q92575 508 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 KIR3DX1Q9H7L2 352 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 ETNK1Q9HBU6 452 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 PIH1D1Q9NWS0 290 aaKnown RBP23.07■■□□□ 1.28
SHC1-201ENST00000366442 HEBP2Q9Y5Z4 205 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 CFAP20Q9Y6A4 193 aaKnown RBP23.07■■□□□ 1.28
SHC1-201ENST00000366442 COLEC10Q9Y6Z7 277 aa23.07■■□□□ 1.28
SHC1-201ENST00000366442 ZNF462Q96JM2 2506 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 OR5K3A6NET4 321 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 AP2A2O94973 939 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 IFNB1P01574 187 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 GSTM1P09488 218 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 NELFEP18615 380 aaKnown RBP23.06■■□□□ 1.28
SHC1-201ENST00000366442 NDUFS1P28331 727 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 CDKN1CP49918 316 aaPredicted RBP23.06■■□□□ 1.28
SHC1-201ENST00000366442 GSTM4Q03013 218 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 LAMB3Q13751 1172 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 LINC00303Q3SY05 128 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 CYB5D1Q6P9G0 228 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 TAS2R42Q7RTR8 314 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 TAB3Q8N5C8 712 aaPredicted RBP23.06■■□□□ 1.28
SHC1-201ENST00000366442 SPDYE1Q8NFV5 336 aaPredicted RBP23.06■■□□□ 1.28
SHC1-201ENST00000366442 OR52K1Q8NGK4 314 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 RMDN2Q96LZ7 410 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 CD180Q99467 661 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 EFHD1Q9BUP0 239 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 SLC12A9Q9BXP2 914 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 SEMA4CQ9C0C4 833 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 LZTFL1Q9NQ48 299 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 FAM8A1Q9UBU6 413 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 SLC24A2Q9UI40 661 aa23.06■■□□□ 1.28
SHC1-201ENST00000366442 HELZ2Q9BYK8 2649 aaKnown RBP23.06■■□□□ 1.28
SHC1-201ENST00000366442 GAS8O95995 478 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 POLBP06746 335 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 PPP1CAP62136 330 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 SH3BP2P78314 561 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 ABHD18Q0P651 414 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 SEMA5AQ13591 1074 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 ZNF658BQ4V348 819 aaPredicted RBP23.05■■□□□ 1.28
SHC1-201ENST00000366442 TIPARPQ7Z3E1 657 aaKnown RBP23.05■■□□□ 1.28
SHC1-201ENST00000366442 LRRC8AQ8IWT6 810 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 LILRA3Q8N6C8 439 aaPredicted RBP23.05■■□□□ 1.28
SHC1-201ENST00000366442 DNAAF3Q8N9W5 541 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 KIAA1143Q96AT1 154 aaPredicted RBP23.05■■□□□ 1.28
SHC1-201ENST00000366442 SLC41A2Q96JW4 573 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 OR6C1Q96RD1 312 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 COG4Q9H9E3 785 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 PAK5Q9P286 719 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 RIMKLBQ9ULI2 386 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 ZKSCAN5Q9Y2L8 839 aa23.05■■□□□ 1.28
SHC1-201ENST00000366442 HEATR9A2RTY3 570 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 FGF5P12034 268 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 MSNP26038 577 aaKnown RBP23.04■■□□□ 1.28
SHC1-201ENST00000366442 RPA4Q13156 261 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 GSE1Q14687 1217 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 SIX1Q15475 284 aaPredicted RBP23.04■■□□□ 1.28
SHC1-201ENST00000366442 CCNG2Q16589 344 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 DBN1Q16643 649 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 DUS1LQ6P1R4 473 aaKnown RBP23.04■■□□□ 1.28
SHC1-201ENST00000366442 DRICH1Q6PGQ1 229 aaPredicted RBP23.04■■□□□ 1.28
SHC1-201ENST00000366442 OOSP2Q86WS3 158 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 KMT5CQ86Y97 462 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 PIANPQ8IYJ0 282 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 ESX1Q8N693 406 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 CCDC89Q8N998 374 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 EXTL1Q92935 676 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 SLC45A3Q96JT2 553 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 RANBP9Q96S59 729 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 ULBP3Q9BZM4 244 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 HRASLS2Q9NWW9 162 aa23.04■■□□□ 1.28
SHC1-201ENST00000366442 IGHV5-51A0A0C4DH38 117 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 GOLGA6L3A6NEY3 463 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 TLCD2A6NGC4 264 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 E7EVH7 732 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 QSOX1O00391 747 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 PRSS56P0CW18 603 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 NSG1P42857 185 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 CD151P48509 253 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 LMAN1P49257 510 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 CYP4F2P78329 520 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 SNX1Q13596 522 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 ITIH4Q14624 930 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 TBR1Q16650 682 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.03■■□□□ 1.28
SHC1-201ENST00000366442 PACS1Q6VY07 963 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 PPP1R21Q6ZMI0 780 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 CARFQ8N187 725 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 TRIM58Q8NG06 486 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 OR52A5Q9H2C5 316 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 GPN2Q9H9Y4 310 aaPredicted RBP23.03■■□□□ 1.28
SHC1-201ENST00000366442 RAB6BQ9NRW1 208 aa23.03■■□□□ 1.28
SHC1-201ENST00000366442 PIKFYVEQ9Y2I7 2098 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms