RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 KCTD20Q7Z5Y7 419 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 ANKS1BQ7Z6G8 1248 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 TMTC1Q8IUR5 882 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 DEFB106AQ8N104 65 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 ZNF557Q8N988 423 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 NT5C3BQ969T7 300 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 FAM149B1Q96BN6 582 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 ARHGEF26Q96DR7 871 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 LMLNQ96KR4 655 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 CCDC42Q96M95 316 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 BAG1Q99933 345 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 MAGEB5Q9BZ81 275 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 TRIM7Q9C029 511 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 THAP2Q9H0W7 228 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 SYNCQ9H7C4 482 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 HEYLQ9NQ87 328 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 PLK2Q9NYY3 685 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 THAP10Q9P2Z0 257 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 RAB23Q9ULC3 237 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 CLEC4EQ9ULY5 219 aa7.9□□□□□ -1.14
YBX3-204ENST00000366290 EPN1Q9Y6I3 576 aaPredicted RBP7.9□□□□□ -1.14
YBX3-204ENST00000366290 CEP192Q8TEP8 1941 aa7.9□□□□□ -1.15
YBX3-204ENST00000366290 TNRC6BQ9UPQ9 1833 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 FRYQ5TBA9 3013 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 TRGV11A0A075B6L2 103 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 A0A0U1RQJ8 604 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 UNC119BA6NIH7 251 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 TMEM200CA6NKL6 621 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 C2CD4BA6NLJ0 364 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 SIGLEC16A6NMB1 481 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 EIF3CLB5ME19 914 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 TRIAP1O43715 76 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 RRP9O43818 475 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 ACSL4O60488 711 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 NDST3O95803 873 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 CYP1A2P05177 515 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 SLC2A3P11169 496 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 GATA3P23771 443 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 CD6P30203 668 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 PPIFP30405 207 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 HLA-FP30511 346 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 RFC1P35251 1148 aaPredicted RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 SRSF5Q13243 272 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 RAB6CQ53S08 254 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 SPDYCQ5MJ68 293 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 CACHD1Q5VU97 1274 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 TMEM215Q68D42 235 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 SFRP4Q6FHJ7 346 aaPredicted RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 NADSYN1Q6IA69 706 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 ANO7Q6IWH7 933 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 PPP1R2P3Q6NXS1 205 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 TAC4Q86UU9 113 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 ADIPOR2Q86V24 386 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 KBTBD6Q86V97 674 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 VPS36Q86VN1 386 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 LRRC8AQ8IWT6 810 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 CCDC170Q8IYT3 715 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.89□□□□□ -1.15
YBX3-204ENST00000366290 EMC1Q8N766 993 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 HJURPQ8NCD3 748 aaPredicted RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 MSANTD4Q8NCY6 345 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 FIBINQ8TAL6 211 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 DDI1Q8WTU0 396 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 ZNF653Q96CK0 615 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 TMA16Q96EY4 203 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 PGAP3Q96FM1 320 aaPredicted RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 OSBPL9Q96SU4 736 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 NPY6RQ99463 290 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 EIF3CQ99613 913 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 DDX50Q9BQ39 737 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 RAB6CQ9H0N0 254 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 CXorf36Q9H7Y0 433 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 ELOVL2Q9NXB9 296 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 RRN3Q9NYV6 651 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 DKK4Q9UBT3 224 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 CNOT8Q9UFF9 292 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 GMEB2Q9UKD1 530 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 NDRG4Q9ULP0 352 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 TFR2Q9UP52 801 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 PCDHGA5Q9Y5G8 931 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.89□□□□□ -1.15
YBX3-204ENST00000366290 WDFY3Q8IZQ1 3526 aa7.89□□□□□ -1.15
YBX3-204ENST00000366290 FAM234BA2RU67 622 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 I6L893 689 aaPredicted RBP7.88□□□□□ -1.15
YBX3-204ENST00000366290 CAPN9O14815 690 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 EPN2O95208 641 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 SPDEFO95238 335 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 MYBL1P10243 752 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 KRT3P12035 628 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 HOXB2P14652 356 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 GABRG2P18507 467 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 P2RY2P41231 377 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 MATKP42679 507 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 SGSHP51688 502 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 ITGA8P53708 1063 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 ARHGAP8P85298 464 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 BYSLQ13895 437 aaKnown RBP7.88□□□□□ -1.15
YBX3-204ENST00000366290 LPAL2Q16609 132 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 PLK5Q496M5 336 aa7.88□□□□□ -1.15
YBX3-204ENST00000366290 CCDC14Q49A88 953 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms