RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IRGCQ6NXR0 463 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FAM92BQ6ZTR7 304 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PIANPQ8IYJ0 282 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 UNC5BQ8IZJ1 945 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 UBXN4Q92575 508 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CDKN2AIPNLQ96HQ2 116 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 RMDN2Q96LZ7 410 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KIR3DX1Q9H7L2 352 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 IMP3Q9NV31 184 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZDHHC3Q9NYG2 299 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 IL17BQ9UHF5 180 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SLC24A2Q9UI40 661 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CRLS1Q9UJA2 301 aa13.35□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ASH1LQ9NR48 2969 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ZNF891A8MT65 544 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 NKX2-8O15522 239 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PSMD3O43242 534 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 LIASO43766 372 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 RASSF9O75901 435 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 PRSS56P0CW18 603 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FOLR1P15328 257 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 STIP1P31948 543 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 KLHL35Q6PF15 583 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SERPINA9Q86WD7 417 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CFAP206Q8IYR0 622 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ESX1Q8N693 406 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 HM13Q8TCT9 377 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 STYXQ8WUJ0 223 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ATG4AQ8WYN0 398 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 C12orf66Q96MD2 445 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 FCRL4Q96PJ5 515 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 MAP3K3Q99759 626 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 CCM2Q9BSQ5 444 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 EFHD1Q9BUP0 239 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 ULBP3Q9BZM4 244 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 OR52A5Q9H2C5 316 aa13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GPN2Q9H9Y4 310 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 GEMIN8Q9NWZ8 242 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-202ENST00000366159 SETXQ7Z333 2677 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SPAG6O75602 509 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SUN1O94901 812 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TIAF1O95411 115 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RALBP11234 206 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SFTPCP11686 197 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 POU6F1Q14863 301 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MEI1Q5TIA1 1274 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 BORAQ6PGQ7 559 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CERS6Q6ZMG9 384 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KMT5CQ86Y97 462 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CARFQ8N187 725 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LRRC45Q96CN5 670 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DCUN1D1Q96GG9 259 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CATSPER2Q96P56 530 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CD180Q99467 661 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ARHGAP9Q9BRR9 750 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FRMD8P1Q9BZ68 369 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ADNPQ9H2P0 1102 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 COG4Q9H9E3 785 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 HRASLS2Q9NWW9 162 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RPS6KL1Q9Y6S9 549 aa13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SPENQ96T58 3664 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 UBR5O95071 2799 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TLCD2A6NGC4 264 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ERI2A8K979 691 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CFAP99D6REC4 459 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 J3QKU1 62 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KIAA0754O94854 1291 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 POLBP06746 335 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SLC35G4P0C7Q5 338 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PDHA2P29803 388 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CD151P48509 253 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CACNG1Q06432 222 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CDC20Q12834 499 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GSE1Q14687 1217 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KCNAB1Q14722 419 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DBN1Q16643 649 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 C6orf15Q6UXA7 325 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LINC00523Q86TU6 105 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 BPHLQ86WA6 291 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PPP1R3BQ86XI6 285 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 D2HGDHQ8N465 521 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CLDN19Q8N6F1 224 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GALNT6Q8NCL4 622 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR13J1Q8NGT2 312 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KIAA1143Q96AT1 154 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TSGA10Q9BZW7 698 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ETNK1Q9HBU6 452 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TUBD1Q9UJT1 453 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RIMKLBQ9ULI2 386 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PCDHGA6Q9Y5G7 932 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 COLEC10Q9Y6Z7 277 aa13.32□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR6C74A6NCV1 312 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms