RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NMD3Q96D46 503 aaKnown RBP13.29□□□□□ -0.28
LDB3-202ENST00000361373 NPAS2Q99743 824 aa13.29□□□□□ -0.28
LDB3-202ENST00000361373 THUMPD1Q9NXG2 353 aaKnown RBP13.29□□□□□ -0.28
LDB3-202ENST00000361373 ARL5AQ9Y689 179 aa13.29□□□□□ -0.28
LDB3-202ENST00000361373 SLC18A1P54219 525 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 RTL4Q6ZR62 310 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 GK5Q6ZS86 529 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 ZNF671Q8TAW3 534 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 ZBED6CLQ96FA7 236 aaPredicted RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 LRIG1Q96JA1 1093 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 IL23AQ9NPF7 189 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 MAT2BQ9NZL9 334 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 ARFGEF2Q9Y6D5 1785 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 TRBV23OR9-2A0A075B6M9 112 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 MCIDASD6RGH6 385 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 TULP2O00295 520 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 B3GALT2O43825 422 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 GPIP06744 558 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 SIRPB2Q5JXA9 342 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 BEND5Q7L4P6 421 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 SLC30A8Q8IWU4 369 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 OR2T34Q8NGX1 318 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 OR2T3Q8NH03 318 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 CLHC1Q8NHS4 586 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 NUAK2Q9H093 628 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 CRNNQ9UBG3 495 aaPredicted RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 FFAR2O15552 330 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 LATS1O95835 1130 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 SRPRAP08240 638 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 TYRP14679 529 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 IMPDH1P20839 514 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 FGFR3P22607 806 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 PTX3P26022 381 aaPredicted RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 NRIP1P48552 1158 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 CCNHP51946 323 aaPredicted RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 KCNJ2P63252 427 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 DLG1Q12959 904 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 C22orf39Q6P5X5 142 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 TRMT10BQ6PF06 316 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 PQLC1Q8N2U9 271 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 BPIFB6Q8NFQ5 453 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 TSGA13Q96PP4 275 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 BTBD1Q9H0C5 482 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 XYLT2Q9H1B5 865 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 MRM3Q9HC36 420 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 MRPS30Q9NP92 439 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 SOCS5O75159 536 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 IQCF3P0C7M6 154 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 NR1H2P55055 460 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 COX10Q12887 443 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 ITPRIPL2Q3MIP1 535 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 LRRC70Q7Z2Q7 622 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 MMAAQ8IVH4 418 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 CMTM8Q8IZV2 173 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 RIOK2Q9BVS4 552 aaKnown RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 ARL8BQ9NVJ2 186 aa13.28□□□□□ -0.28
LDB3-202ENST00000361373 IFT80Q9P2H3 777 aaPredicted RBP13.28□□□□□ -0.28
LDB3-202ENST00000361373 UGT2B11O75310 529 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 TULP3O75386 442 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 IFNW1P05000 195 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 DGKEP52429 567 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 HERVK_113P63132 956 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 ZNF155Q12901 538 aaPredicted RBP13.27□□□□□ -0.28
LDB3-202ENST00000361373 FOXR1Q6PIV2 292 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 MBOAT1Q6ZNC8 495 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 OR13C4Q8NGS5 318 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 EXOSC8Q96B26 276 aaKnown RBP13.27□□□□□ -0.28
LDB3-202ENST00000361373 ZNF641Q96N77 438 aaPredicted RBP13.27□□□□□ -0.28
LDB3-202ENST00000361373 ERVK-6Q9BXR3 956 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 ABI3Q9P2A4 366 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 MAP10Q9P2G4 905 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 EGFL7Q9UHF1 273 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 LEFTY2O00292 366 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 GSC2O15499 205 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 ENTPD5O75356 428 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 CHRNA1P02708 482 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 ALAS2P22557 587 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 CCR8P51685 355 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 RPS14P62263 151 aaKnown RBP13.27□□□□□ -0.28
LDB3-202ENST00000361373 KCNJ11Q14654 390 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 TEAD2Q15562 447 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 GRASPQ7Z6J2 395 aaPredicted RBP13.27□□□□□ -0.28
LDB3-202ENST00000361373 ZNF540Q8NDQ6 660 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 TSPAN14Q8NG11 270 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 AGAP11Q8TF27 550 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 PEX13Q92968 403 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 C6orf62Q9GZU0 229 aaPredicted RBP13.27□□□□□ -0.28
LDB3-202ENST00000361373 HMG20AQ9NP66 347 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 SLC2A4RGQ9NR83 387 aa13.27□□□□□ -0.28
LDB3-202ENST00000361373 KRT36O76013 467 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 RGS20O76081 388 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 TIE1P35590 1138 aa13.27□□□□□ -0.29
LDB3-202ENST00000361373 BNIPLQ7Z465 357 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms