RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 RAD51AP1Q96B01 352 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 PHF21AQ96BD5 680 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 CDKN2AIPNLQ96HQ2 116 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 CARS2Q9HA77 564 aaKnown RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 PRDM6Q9NQX0 595 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF711Q9Y462 761 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 CHURC1-FNTBB4DL54 471 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 PTGESO14684 152 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 FFAR3O14843 346 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 GPR42O15529 346 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 PRAMEF11O60813 436 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 LYPLA1O75608 230 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ADH1BP00325 375 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ABCB1P08183 1280 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ACTR1BP42025 376 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 FNTBP49356 437 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 GALK1P51570 392 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ACTR1AP61163 376 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 SLC10A7Q0GE19 358 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 TMED1Q13445 227 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ZNHIT3Q15649 155 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 PARM1Q6UWI2 310 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 PARGQ86W56 976 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 RALGPS2Q86X27 583 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 CPNE8Q86YQ8 564 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF276Q8N554 614 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 WDTC1Q8N5D0 677 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 GLB1L3Q8NCI6 653 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 BHLHE22Q8NFJ8 381 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 B4GALNT2Q8NHY0 566 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 HSPA12BQ96MM6 686 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 CLSTN3Q9BQT9 956 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 KIFC1Q9BW19 673 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 LRTM1Q9HBL6 345 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 TBC1D23Q9NUY8 699 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 FKBPLQ9UIM3 349 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 MRPS33Q9Y291 106 aaKnown RBP6.94□□□□□ -1.3
RAB5B-201ENST00000360299 KLHL20Q9Y2M5 609 aa6.94□□□□□ -1.3
RAB5B-201ENST00000360299 NPEPPSL1A6NEC2 478 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 M0QZQ0 153 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 RFXANKO14593 260 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 TNFP01375 233 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 UQCRBP14927 111 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ATP6V1C1P21283 382 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 FOXC1Q12948 553 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PRKD1Q15139 912 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 TRMT10BQ6PF06 316 aaKnown RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PIGWQ7Z7B1 504 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 CPSF7Q8N684 471 aaKnown RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 TTC9BQ8N6N2 239 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 RCN3Q96D15 328 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PGAP3Q96FM1 320 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 RMND5BQ96G75 393 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 NMUR1Q9HB89 426 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 C3orf18Q9UK00 162 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PCDHB3Q9Y5E6 796 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PRR5-ARHGAP8B1AHC4 643 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 TMEM189-UBE2V1I3L0A0 370 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PI15O43692 258 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 GSTM1P09488 218 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 LINC00032P0C843 101 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 TCF4P15884 667 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 CDH3P22223 829 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 MPSTP25325 297 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 DEFA1P59665 94 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 DEFA3P59666 94 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ARHGAP8P85298 464 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ALDH6A1Q02252 535 aaKnown RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 TRIM61Q5EBN2 209 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 PPM1JQ5JR12 505 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 COLEC12Q5KU26 742 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 UBXN11Q5T124 520 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 SLC30A9Q6PML9 568 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 CYP2R1Q6VVX0 501 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 GDPD4Q6W3E5 623 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 DNAJC14Q6Y2X3 702 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ULK2Q8IYT8 1036 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 SPATA6LQ8N4H0 392 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 DCAKDQ8WVC6 231 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 CLIP3Q96DZ5 547 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 OR52E6Q96RD3 313 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 AGAP2Q99490 1192 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 RAB11FIP5Q9BXF6 653 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 LINC00597Q9H2U6 94 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 IPPKQ9H8X2 491 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 EXOSC4Q9NPD3 245 aaKnown RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ZDHHC3Q9NYG2 299 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 BTRCQ9Y297 605 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 MYRFQ9Y2G1 1151 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 A0A087WXM4 84 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 CBSLP0DN79 551 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ATP6V1B1P15313 513 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 CBSP35520 551 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 SLC1A2P43004 574 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 AP1S2P56377 157 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 MRPS22P82650 360 aaKnown RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 SLC18A2Q05940 514 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 ELOAQ14241 798 aaKnown RBP6.93□□□□□ -1.3
RAB5B-201ENST00000360299 NCF4Q15080 339 aa6.93□□□□□ -1.3
RAB5B-201ENST00000360299 INO80DQ53TQ3 878 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms