RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 RGMBQ6NW40 437 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 LRRC55Q6ZSA7 311 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 ZNF433Q8N7K0 673 aaPredicted RBP9.57□□□□□ -0.88
CUX1-203ENST00000360264 GAL3ST4Q96RP7 486 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 LGR4Q9BXB1 951 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 PTPRMP28827 1452 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 TACSTD2P09758 323 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 ZNF3P17036 446 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 GNAZP19086 355 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 RFTN1Q14699 578 aaPredicted RBP9.57□□□□□ -0.88
CUX1-203ENST00000360264 HEPACAMQ14CZ8 416 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 HSDL2Q6YN16 418 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 HEPHQ9BQS7 1158 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 BRINP2Q9C0B6 783 aa9.57□□□□□ -0.88
CUX1-203ENST00000360264 E2F2Q14209 437 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SLC25A25Q6KCM7 469 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 OVCA2Q8WZ82 227 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ART5Q96L15 291 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 MKKSQ9NPJ1 570 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 STOX2Q9P2F5 926 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 C2orf80Q0P641 193 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SLC34A3Q8N130 599 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 MRPS30Q9NP92 439 aaKnown RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 ZNF490Q9ULM2 529 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 CEP170BQ9Y4F5 1589 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 TDRD6O60522 2096 aaKnown RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 CD52P31358 61 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SNAP47Q5SQN1 464 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 C16orf46Q6P387 395 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PGBD2Q6P3X8 592 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PRR23CQ6ZRP0 262 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ACDQ96AP0 544 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SLC39A3Q9BRY0 314 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ALKBH4Q9NXW9 302 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SMPD3Q9NY59 655 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 PDP1Q9P0J1 537 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 BTRCQ9Y297 605 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SMCO3A2RU48 225 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 MLLT3P42568 568 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 CASP5P51878 434 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PRMT2P55345 433 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 UBXN11Q5T124 520 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ZNF615Q8N8J6 731 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 MIPEPQ99797 713 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SMURF1Q9HCE7 757 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 RLN2P04090 185 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 NEDD4LQ96PU5 975 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 RNF121Q9H920 327 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PCNX1Q96RV3 2341 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PDPK1O15530 556 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PGRP06401 933 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 CYP4B1P13584 511 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 TEX44Q53QW1 395 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 FAM43BQ6ZT52 329 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 ADGRD2Q7Z7M1 963 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 DGAT2Q96PD7 388 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 FADS2O95864 444 aaKnown RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 AHCYP23526 432 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PIK3CBP42338 1070 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 AUHQ13825 339 aaKnown RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 ZNF548Q8NEK5 533 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 TSTD1Q8NFU3 115 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ARL8BQ9NVJ2 186 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 MAP4K5Q9Y4K4 846 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ZNF726A6NNF4 738 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ALOX15BO15296 676 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 MMP3P08254 477 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 PVALBP20472 110 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 PDGFRLQ15198 375 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 LIX1Q8N485 282 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 ZNF282Q9UDV7 671 aaPredicted RBP9.56□□□□□ -0.88
CUX1-203ENST00000360264 ALPK2Q86TB3 2170 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 SCN8AQ9UQD0 1980 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 CCR10P46092 362 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 LCLAT1Q6UWP7 414 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 KLHL6Q8WZ60 621 aa9.56□□□□□ -0.88
CUX1-203ENST00000360264 RGS10O43665 173 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ECHDC2Q86YB7 292 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 ART4Q93070 314 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 LDAHQ9H6V9 325 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 CNTNAP1P78357 1384 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 RCBTB2O95199 551 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PTGER3P43115 390 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 USP43Q70EL4 1123 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 SLC28A3Q9HAS3 691 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 TMPRSS11EQ9UL52 423 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 GPIP06744 558 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 PTPN2P17706 415 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 HNRNPH3P31942 346 aaKnown RBP9.55□□□□□ -0.88
CUX1-203ENST00000360264 ARL3P36405 182 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 CAPSQ13938 189 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 SMARCD3Q6STE5 483 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 NUS1Q96E22 293 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 KLHL32Q96NJ5 620 aa9.55□□□□□ -0.88
CUX1-203ENST00000360264 DEFB118Q96PH6 123 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms