RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 FASTKD3Q14CZ7 662 aaKnown RBP4.8□□□□□ -1.64
SCN3A-202ENST00000360093 NRF1Q16656 503 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 EIPR1Q53HC9 387 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 IL23RQ5VWK5 629 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 RTL4Q6ZR62 310 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-202ENST00000360093 SLC43A3Q8NBI5 491 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 TSTD1Q8NFU3 115 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 KBTBD8Q8NFY9 601 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 CLEC4CQ8WTT0 213 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 MIEF2Q96C03 454 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 BORCS6Q96GS4 357 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 ADAMTS10Q9H324 1103 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 DPEP2Q9H4A9 486 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 ALG2Q9H553 416 aa4.8□□□□□ -1.64
SCN3A-202ENST00000360093 NRAPQ86VF7 1730 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 NEMP2A6NFY4 417 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PLK4O00444 970 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TMCC2O75069 709 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 KRT33AO76009 404 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LRATO95237 230 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ATP5A1P25705 553 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 GDI1P31150 447 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 MPIP34949 423 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 HOXD13P35453 343 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PTDSS1P48651 473 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SP140Q13342 867 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RIPK1Q13546 671 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 HERC3Q15034 1050 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM44Q2T9K0 475 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TIGD2Q4W5G0 525 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LACTB2Q53H82 288 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 MBOAT1Q6ZNC8 495 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PARGQ86W56 976 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RELL1Q8IUW5 271 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PQLC1Q8N2U9 271 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SVOPLQ8N434 492 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 APOLD1Q96LR9 279 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SEMA6AQ9H2E6 1030 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CLK4Q9HAZ1 481 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PRR5-ARHGAP8B1AHC4 643 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ABLIM1O14639 778 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CHST10O43529 356 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 GPR32O75388 356 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 JAG1P78504 1218 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ARHGAP8P85298 464 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 KCNJ11Q14654 390 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SIRPB2Q5JXA9 342 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 GLYATQ6IB77 296 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 AMIGO3Q86WK7 504 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CIR1Q86X95 450 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ZCCHC7Q8N3Z6 543 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TSPAN14Q8NG11 270 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ACAT2Q9BWD1 397 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SLC32A1Q9H598 525 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 IL1RAPQ9NPH3 570 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SLC2A4RGQ9NR83 387 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 IGKV6-21A0A0C4DH24 114 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CCDC162PA2VCL2 907 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FADS2P1A8MWK0 482 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 OR1F1O43749 312 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FAM155BO75949 473 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 IQCF3P0C7M6 154 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 IL1R2P27930 398 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RPS24P62847 133 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ERVK-8P63133 956 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TRAP1Q12931 704 aaKnown RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 B3GNT6Q6ZMB0 384 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TIFABQ6ZNK6 161 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 RANBP3LQ86VV4 465 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CPNE9Q8IYJ1 553 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 UBR7Q8N806 425 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF540Q8NDQ6 660 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LRRN4Q8WUT4 740 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CLIP3Q96DZ5 547 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FAM84AQ96KN4 292 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PCYT2Q99447 389 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 GSDMCQ9BYG8 508 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SFXN1Q9H9B4 322 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TMEM59LQ9UK28 342 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LYVE1Q9Y5Y7 322 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 DNAJC25-GNG10A0A024R161 153 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 FAM159BA6NKW6 160 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SMNDC1O75940 238 aaKnown RBP eCLIP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 GALTP07902 379 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 LAMP2P13473 410 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 ATP1B2P14415 290 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TAS2R39P59534 338 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 NEDD8Q15843 81 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 PPM1JQ5JR12 505 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 TRAF7Q6Q0C0 670 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SPESP1Q6UW49 350 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 SCIMPQ6UWF3 145 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 OAFQ86UD1 273 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 CAMKVQ8NCB2 501 aa4.79□□□□□ -1.64
SCN3A-202ENST00000360093 POF1BQ8WVV4 589 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms