RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 LINGO3P0C6S8 592 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 GABRR2P28476 465 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 PRKCDQ05655 676 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 KLHL26Q53HC5 615 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 BSNDQ8WZ55 320 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 CENPNQ96H22 339 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 PCDHB18PQ96TA0 734 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 METTL8Q9H825 291 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 GOLGA2P5Q9HBQ8 144 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 KIAA1522Q9P206 1035 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 RPL26L1Q9UNX3 145 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 TRIM17Q9Y577 477 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 NRCAMQ92823 1304 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 CCL16O15467 120 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 PGDP52209 483 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SLC25A52Q3SY17 297 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SCGB2B2Q4G0G5 96 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SLC26A9Q7LBE3 791 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 GPALPP1Q8IXQ4 340 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 HAS1Q92839 578 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 LGR4Q9BXB1 951 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 PKMP14618 531 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 IL12BP29460 328 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 TARDBPQ13148 414 aaKnown RBP eCLIP15.84■□□□□ 0.136e-7■■■■■ 27.4
COL18A1-203ENST00000359759 MINDY4Q4G0A6 757 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 IRF2BP2Q7Z5L9 587 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 CAND1Q86VP6 1230 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 IQCHQ86VS3 1027 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 GPATCH1Q9BRR8 931 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 CUEDC1Q9NWM3 386 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 LRRC72A6NJI9 287 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 KLRC4O43908 158 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 ACVR2AP27037 513 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 NMBRP28336 390 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 SLC51AQ86UW1 340 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 OR6K6Q8NGW6 343 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 EIF2B4Q9UI10 523 aaKnown RBP15.84■□□□□ 0.13
COL18A1-203ENST00000359759 ABCG2Q9UNQ0 655 aa15.84■□□□□ 0.13
COL18A1-203ENST00000359759 BLMHQ13867 455 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 ECM1Q16610 540 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 BMT2Q1RMZ1 405 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 MED27Q6P2C8 311 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 NAXEQ8NCW5 288 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 ESAMQ96AP7 390 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 MAGEE1Q9HCI5 957 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 KCNMB3Q9NPA1 279 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 AASSQ9UDR5 926 aa15.83■□□□□ 0.13
COL18A1-203ENST00000359759 CD163L1Q9NR16 1453 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 UGT2B4P06133 528 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 BNIP1Q12981 228 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 PLPP4Q5VZY2 271 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 KIAA1161Q6NSJ0 714 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 GRPEL2Q8TAA5 225 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 CRELD1Q96HD1 420 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 GMIPQ9P107 970 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 MPZL2O60487 215 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 AVPR1BP47901 424 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 NOMO1Q15155 1222 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 XYLT1Q86Y38 959 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SLITRK4Q8IW52 837 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SPATA22Q8NHS9 363 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 CNTNAP1P78357 1384 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 USP31Q70CQ4 1352 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SMCO3A2RU48 225 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 H3BNX3 289 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 GNRH1P01148 92 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 MTHFD1P11586 935 aaKnown RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF823P16415 610 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 ASMTP46597 345 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 RPIAP49247 311 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 S100A10P60903 97 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 C6orf183Q5T699 404 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 ANKRD22Q5VYY1 191 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 GPR135Q8IZ08 494 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 CSPG4P5Q96PW8 444 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 BARD1Q99728 777 aaKnown RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 RNF208Q9H0X6 261 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SQORQ9Y6N5 450 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 MAGEB17A8MXT2 336 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 NARSO43776 548 aaKnown RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 MAFO75444 373 aaPredicted RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 LDOC1O95751 146 aaPredicted RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 RABGGTBP53611 331 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SEC13P55735 322 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 DUSP4Q13115 394 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 MSANTD2Q6P1R3 559 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 PRSS58Q8IYP2 241 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SLC22A15Q8IZD6 547 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 SRFBP1Q8NEF9 429 aaKnown RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 OR2L8Q8NGY9 312 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 OR2AJ1Q8NGZ0 328 aa15.83■□□□□ 0.12
COL18A1-203ENST00000359759 ZNF471Q9BX82 626 aaPredicted RBP15.83■□□□□ 0.12
COL18A1-203ENST00000359759 E9PAM4 449 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 L7N2F9 121 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 PRMT5O14744 637 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CYP3A4P08684 503 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms