RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CLYBLQ8N0X4 340 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 HDDC3Q8N4P3 179 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 ASB12Q8WXK4 309 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 FAM136AQ96C01 138 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 LINC00615Q96LM1 132 aaPredicted RBP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CCT7Q99832 543 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CCM2Q9BSQ5 444 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 C1QTNF7Q9BXJ2 289 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 TRIM39Q9HCM9 518 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CYP4F12Q9HCS2 524 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CD274Q9NZQ7 290 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 ZDHHC2Q9UIJ5 367 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 FZD4Q9ULV1 537 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 DNMT3AQ9Y6K1 912 aaPredicted RBP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CFAP73A6NFT4 308 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 GIPC1O14908 333 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 FFAR2O15552 330 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 GPC4O75487 556 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 DNAJC8O75937 253 aaPredicted RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 SLCO2B1O94956 709 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 FSBPO95073 299 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 UNC5CO95185 931 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 HOXB2P14652 356 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 MPSTP25325 297 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 CCR7P32248 378 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 SCTRP47872 440 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 PIK3CGP48736 1102 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 HNMTP50135 292 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 COPAP53621 1224 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 PKNOX1P55347 436 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 AP1S2P56377 157 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 ACTN3Q08043 901 aaPredicted RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 LCP2Q13094 533 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 CCINQ13939 588 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 UBXN2BQ14CS0 331 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 PON2Q15165 354 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 TTC31Q49AM3 519 aaPredicted RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 AGBL4Q5VU57 503 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 CWF19L1Q69YN2 538 aaKnown RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 RAET1GQ6H3X3 334 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 SBSNQ6UWP8 590 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 IL17RCQ8NAC3 791 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 EZH1Q92800 747 aaPredicted RBP13.26□□□□□ -0.29
CCDC197-201ENST00000359253 GLMNQ92990 594 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 SLC12A9Q9BXP2 914 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 LMAN1LQ9HAT1 526 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 PREBQ9HCU5 417 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 ZDHHC4Q9NPG8 344 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 DLGAP2Q9P1A6 1054 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 PLXNB3Q9ULL4 1909 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 CDYLQ9Y232 598 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 ITM2BQ9Y287 266 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 NCKAP1Q9Y2A7 1128 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 TRAF6Q9Y4K3 522 aa13.26□□□□□ -0.29
CCDC197-201ENST00000359253 CKAP5Q14008 2032 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 FCHO1O14526 889 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 GRID2O43424 1007 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 PI15O43692 258 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 DIAPH2O60879 1101 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 CDK14O94921 469 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 PDGFBP01127 241 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 EGFP01133 1207 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 ANXA5P08758 320 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 HIST1H2AGP0C0S8 130 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 ITGB6P18564 788 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 HIST1H2ADP20671 130 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 CYP2A7P20853 494 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 CD72P21854 359 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 CALB2P22676 271 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 TARSP26639 723 aaKnown RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 EEF1DP29692 281 aaKnown RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 METAP1P53582 386 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 INHBCP55103 352 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 SEC13P55735 322 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 CLCQ05315 142 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 PPP1R3AQ16821 1122 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 C2orf27AQ580R0 203 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 ATG14Q6ZNE5 492 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 TMPRSS6Q8IU80 811 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 AADATQ8N5Z0 425 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 CEP70Q8NHQ1 597 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 LKAAEAR1Q8TD35 194 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 ACTRT2Q8TDY3 377 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 ZNF483Q8TF39 744 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 UBTD2Q8WUN7 234 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 ELMO1Q92556 727 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 EXT2Q93063 718 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 NSL1Q96IY1 281 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 HIC2Q96JB3 615 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 MAELQ96JY0 434 aaKnown RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 HIST1H2AHQ96KK5 128 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 HIST1H2AJQ99878 128 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 H2AFJQ9BTM1 129 aa13.25□□□□□ -0.29
CCDC197-201ENST00000359253 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
CCDC197-201ENST00000359253 PARVBQ9HBI1 364 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms