RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 B4GALT6Q9UBX8 382 aa14.66□□□□□ -0.06
GABPB1-202ENST00000359031 SLC4A7Q9Y6M7 1214 aa14.66□□□□□ -0.06
GABPB1-202ENST00000359031 MYOFQ9NZM1 2061 aa14.66□□□□□ -0.06
GABPB1-202ENST00000359031 DOCK6Q96HP0 2047 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 PRSS51A0A1B0GVH4 220 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 TSPAN11A1L157 253 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 A8MX80 341 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 OR7A17O14581 309 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 SPINT3P49223 89 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 SLC7A2P52569 658 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 RCAN2Q14206 197 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 MAP7D1Q3KQU3 841 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 ATP6AP1LQ52LC2 224 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 CDKL4Q5MAI5 379 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 LY6G5CQ5SRR4 150 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 LPCAT4Q643R3 524 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 SPATA24Q86W54 205 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 MINDY1Q8N5J2 469 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 CHST14Q8NCH0 376 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 LRGUKQ96M69 825 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 NKX2-4Q9H2Z4 354 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 NSUN3Q9H649 340 aaKnown RBP14.65□□□□□ -0.06
GABPB1-202ENST00000359031 SMOXQ9NWM0 555 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 WWOXQ9NZC7 414 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 SLCO3A1Q9UIG8 710 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 RIMS3Q9UJD0 308 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 TSR3Q9UJK0 312 aaKnown RBP14.65□□□□□ -0.06
GABPB1-202ENST00000359031 ERVW-1Q9UQF0 538 aa14.65□□□□□ -0.06
GABPB1-202ENST00000359031 PIKFYVEQ9Y2I7 2098 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 PRORSD1PA6NEY8 169 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 ZNF197O14709 1029 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 SMNDC1O75940 238 aaKnown RBP eCLIP14.64□□□□□ -0.07
GABPB1-202ENST00000359031 STAMBPO95630 424 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 CAPN1P07384 714 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 OR56A5P0C7T3 313 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 POLR2EP19388 210 aaKnown RBP14.64□□□□□ -0.07
GABPB1-202ENST00000359031 MSH3P20585 1137 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 VIPR1P32241 457 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 PIK3CGP48736 1102 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 VASPP50552 380 aaPredicted RBP14.64□□□□□ -0.07
GABPB1-202ENST00000359031 NME5P56597 212 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 KCNK10P57789 538 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 DCDC1P59894 354 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 TRAF3Q13114 568 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 ARHGEF7Q14155 803 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 ATP13A5Q4VNC0 1218 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 IRAK1BP1Q5VVH5 260 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 TTC23LQ6PF05 361 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 LAYNQ6UX15 382 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 KIAA1958Q8N8K9 716 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 OR4F6Q8NGB9 312 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 OR2A12Q8NGT7 310 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 OR2T11Q8NH01 316 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 METTL6Q8TCB7 284 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 HERVK_113Q902F9 699 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 SPDL1Q96EA4 605 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 DUS3LQ96G46 650 aaKnown RBP14.64□□□□□ -0.07
GABPB1-202ENST00000359031 KLHL32Q96NJ5 620 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 EGFL8Q99944 293 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 HEPHQ9BQS7 1158 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 TMEM79Q9BSE2 394 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 HEBP1Q9NRV9 189 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 RAD18Q9NS91 495 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 ELOVL2Q9NXB9 296 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 NFKBIL1Q9UBC1 381 aaPredicted RBP14.64□□□□□ -0.07
GABPB1-202ENST00000359031 OPTCQ9UBM4 332 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 DTNAQ9Y4J8 743 aa14.64□□□□□ -0.07
GABPB1-202ENST00000359031 A0A1W2PP18 115 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 DYTNA2CJ06 578 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 GRXCR2A6NFK2 248 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 C5orf67F2Z3F1 127 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 TAPBPO15533 448 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 EEDO75530 441 aaKnown RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 WDR47O94967 919 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 ENO2P09104 434 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 EPCAMP16422 314 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 TCN1P20061 433 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 HMOX2P30519 316 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 MSX2P35548 267 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 ARL1P40616 181 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 HSPA7P48741 367 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 DIO3P55073 304 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 SEMG2Q02383 582 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 RALGDSQ12967 914 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 SKIV2LQ15477 1246 aaKnown RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 PHKG1Q16816 387 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 C18orf21Q32NC0 220 aaPredicted RBP14.63□□□□□ -0.07
GABPB1-202ENST00000359031 GRAMD1BQ3KR37 738 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 SFT2D3Q587I9 215 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 FAM156AQ8NDB6 213 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 MICAL1Q8TDZ2 1067 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 ATP6V1E2Q96A05 226 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 RHBDF1Q96CC6 855 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 BTBD9Q96Q07 612 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 ACOX2Q99424 681 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 TRIM54Q9BYV2 358 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 CD244Q9BZW8 370 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 VCXQ9H320 206 aa14.63□□□□□ -0.07
GABPB1-202ENST00000359031 IPPKQ9H8X2 491 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms