RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 AP1S1P61966 158 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ADGRG6Q86SQ4 1221 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 HID1Q8IV36 788 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 JPH3Q8WXH2 748 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MAFIPQ8WZ33 124 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 DPAGT1Q9H3H5 408 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ACSS2Q9NR19 701 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SLC39A1Q9NY26 324 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MALT1Q9UDY8 824 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SPATA31A6Q5VVP1 1343 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CCNDBP1O95273 360 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SERPINA3P01011 423 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CKMP06732 381 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF286BP0CG31 522 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 RPS3P23396 243 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MANFP55145 182 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SETMARQ53H47 684 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CEP76Q8TAP6 659 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZYG11BQ9C0D3 744 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MGAT4AQ9UM21 535 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 RFPL2O75678 378 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SAGP10523 405 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CDH5P33151 784 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CDH12P55289 794 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ECM1Q16610 540 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 FAM76BQ5HYJ3 339 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TOMM5Q8N4H5 51 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZBTB45Q96K62 511 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TMLHEQ9NVH6 421 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MEMO1Q9Y316 297 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF638Q14966 1978 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 HTRA2O43464 458 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 TNNI3P19429 210 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MATN1P21941 496 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ALDH7A1P49419 539 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 QSOX2Q6ZRP7 698 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 GTPBP3Q969Y2 492 aaKnown RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 GAL3ST3Q96A11 431 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 ZFP3Q96NJ6 502 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CSPG4P5Q96PW8 444 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
COL6A6-201ENST00000358511 USP29Q9HBJ7 922 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 MTMR10Q9NXD2 777 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 CMAHPQ9Y471 501 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 SCN11AQ9UI33 1791 aa8.66□□□□□ -1.02
COL6A6-201ENST00000358511 DLGAP1O14490 977 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 TRIM3O75382 744 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PSMD10O75832 226 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 RSL1D1O76021 490 aaKnown RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CBX5P45973 191 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 TEX44Q53QW1 395 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 FAM98AQ8NCA5 519 aaKnown RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 DENND6BQ8NEG7 585 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SLC13A3Q8WWT9 602 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 TCEAL3Q969E4 200 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 TMBIM1Q969X1 311 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 FAM84AQ96KN4 292 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 NUDT4Q9NZJ9 180 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 FUOMA2VDF0 154 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 A6NHS1 94 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CLDN9O95484 217 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ITGB1P05556 798 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 MTHFD1P11586 935 aaKnown RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ICAM3P32942 547 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CAP2P40123 477 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CLCQ05315 142 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ZNHIT3Q15649 155 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CHST15Q7LFX5 561 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SCML4Q8N228 414 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SLC4A11Q8NBS3 891 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PIGKQ92643 395 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CD93Q9NPY3 652 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 POLE4Q9NR33 117 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SNTG2Q9NY99 539 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 MARK1Q9P0L2 795 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 QSOX1O00391 747 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 NME6O75414 186 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 LDOC1O95751 146 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 HSD3B1P14060 373 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 RPL9P32969 192 aaKnown RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CCR10P46092 362 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 MTPNP58546 118 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 RPL19P84098 196 aaKnown RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 SEMA3AQ14563 771 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PCBP1Q15365 356 aaKnown RBP eCLIP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 GPR158Q5T848 1215 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 CIR1Q86X95 450 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 FBXL20Q96IG2 436 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 MAGEB17A8MXT2 336 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 PDCD5O14737 125 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 NUDT14O95848 222 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 ANXA3P12429 323 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 EEFSECP57772 596 aaKnown RBP8.65□□□□□ -1.02
COL6A6-201ENST00000358511 RAB12Q6IQ22 244 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 DPY19L3Q6ZPD9 716 aa8.65□□□□□ -1.02
COL6A6-201ENST00000358511 LMAN2LQ9H0V9 348 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms