RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ISL2Q96A47 359 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 TSSK1BQ9BXA7 367 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 GAREM1Q9H706 876 aa24.9■■□□□ 1.58
SSBP3-202ENST00000357475 OTOGLQ3ZCN5 2332 aa24.89■■□□□ 1.58
SSBP3-202ENST00000357475 C17orf113A0A1B0GUU1 675 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 KHNYNO15037 678 aaKnown RBP24.89■■□□□ 1.57
SSBP3-202ENST00000357475 GPC4O75487 556 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 STMN1P16949 149 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 ENGP17813 658 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 CD9P21926 228 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 RPL10P27635 214 aaKnown RBP24.89■■□□□ 1.57
SSBP3-202ENST00000357475 SERPINB8P50452 374 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 SLC12A2P55011 1212 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 IRF9Q00978 393 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 DMPKQ09013 629 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 SPEM2Q0P670 501 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 GBX1Q14549 363 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 RIBC1Q8N443 379 aaPredicted RBP24.89■■□□□ 1.57
SSBP3-202ENST00000357475 SPATA6LQ8N4H0 392 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 ZNF548Q8NEK5 533 aaPredicted RBP24.89■■□□□ 1.57
SSBP3-202ENST00000357475 INPP5DQ92835 1189 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 GTPBP2Q9BX10 602 aaKnown RBP24.89■■□□□ 1.57
SSBP3-202ENST00000357475 UNKQ9C0B0 810 aaKnown RBP24.89■■□□□ 1.57
SSBP3-202ENST00000357475 VIPAS39Q9H9C1 493 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 TBC1D29Q9UFV1 150 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 PSMD13Q9UNM6 376 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 WDR37Q9Y2I8 494 aa24.89■■□□□ 1.57
SSBP3-202ENST00000357475 GOLGA8RI6L899 631 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 SNX2O60749 519 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 PIAS2O75928 621 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 TOP3BO95985 862 aaKnown RBP24.88■■□□□ 1.57
SSBP3-202ENST00000357475 LMNAP02545 664 aaKnown RBP24.88■■□□□ 1.57
SSBP3-202ENST00000357475 ACTR1BP42025 376 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 ACTR1AP61163 376 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 SYTL3Q4VX76 610 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 LGSNQ5TDP6 509 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 METRNLQ641Q3 311 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 SPDYE1Q8NFV5 336 aaPredicted RBP24.88■■□□□ 1.57
SSBP3-202ENST00000357475 NUSAP1Q9BXS6 441 aaKnown RBP24.88■■□□□ 1.57
SSBP3-202ENST00000357475 CENPHQ9H3R5 247 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 PRDM8Q9NQV8 689 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 RUVBL2Q9Y230 463 aaKnown RBP24.88■■□□□ 1.57
SSBP3-202ENST00000357475 CABIN1Q9Y6J0 2220 aa24.88■■□□□ 1.57
SSBP3-202ENST00000357475 A0A1B0GTQ1 180 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 LNP1A1A4G5 178 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 F8W8V4 182 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 TSPAN12O95859 305 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 C2P06681 752 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 ZNF37AP17032 561 aaPredicted RBP24.87■■□□□ 1.57
SSBP3-202ENST00000357475 KRT15P19012 456 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 TYK2P29597 1187 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 RXRGP48443 463 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 HNRNPKP61978 463 aaKnown RBP eCLIP24.87■■□□□ 1.57
SSBP3-202ENST00000357475 ILF3Q12906 894 aaKnown RBP eCLIP24.87■■□□□ 1.572e-9■□□□□ 9
SSBP3-202ENST00000357475 DLG1Q12959 904 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 LRP8Q14114 963 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 TIFABQ6ZNK6 161 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 RAPH1Q70E73 1250 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 EEF1AKMT1Q8WVE0 214 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 MTBPQ96DY7 904 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 TSPAN17Q96FV3 270 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 GPAMQ9HCL2 828 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 PARD6AQ9NPB6 346 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 RXFP3Q9NSD7 469 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 HCN4Q9Y3Q4 1203 aa24.87■■□□□ 1.57
SSBP3-202ENST00000357475 A0A096LPK6 155 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 H3BM21 787 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 SLCO2B1O94956 709 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 APOA4P06727 396 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 DGKAP23743 735 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 SKIV2L2P42285 1042 aaKnown RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 PIWIL4Q7Z3Z4 852 aaKnown RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 TAF8Q7Z7C8 310 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 SLC25A45Q8N413 288 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 ASZ1Q8WWH4 475 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 RUFY1Q96T51 708 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 VPS11Q9H270 941 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 SCHIP1Q9P0W5 487 aaPredicted RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 SPASTQ9UBP0 616 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 IKZF3Q9UKT9 509 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 LIN7AO14910 233 aaPredicted RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 RGS16O15492 202 aaPredicted RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 AQP9O43315 295 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 BRAFP15056 766 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 ILF2Q12905 390 aaKnown RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 PLEKHS1Q5SXH7 462 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 UGT3A1Q6NUS8 523 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 SH2D5Q6ZV89 423 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 KANSL1Q7Z3B3 1105 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 GATAD2AQ86YP4 633 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 PLD6Q8N2A8 252 aaKnown RBP24.86■■□□□ 1.57
SSBP3-202ENST00000357475 TMEM159Q96B96 161 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 LINGO1Q96FE5 620 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 GSDMCQ9BYG8 508 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 WWP1Q9H0M0 922 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 OR52A5Q9H2C5 316 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 POPDC3Q9HBV1 291 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 TMBIM4Q9HC24 238 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 PCMTD2Q9NV79 361 aa24.86■■□□□ 1.57
SSBP3-202ENST00000357475 TAAR2Q9P1P5 351 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms