RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ATG14Q6ZNE5 492 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 MYO1HQ8N1T3 1032 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 EXT2Q93063 718 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 ZNF514Q96K75 400 aaPredicted RBP17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 BMFQ96LC9 184 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 LINC00615Q96LM1 132 aaPredicted RBP17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 PLCD4Q9BRC7 762 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 GATA5Q9BWX5 397 aaPredicted RBP17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 ACSS2Q9NR19 701 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 FAM8A1Q9UBU6 413 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 ADAMTS6Q9UKP5 1117 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 RNF112Q9ULX5 631 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 GPR34Q9UPC5 381 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 ARL2BPQ9Y2Y0 163 aa17.81■□□□□ 0.44
SMARCD3-202ENST00000356800 SLC5A10A0PJK1 596 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 H0Y8X5 98 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 EIF3FO00303 357 aaPredicted RBP17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 SLCO2B1O94956 709 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 ENO3P13929 434 aaPredicted RBP17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CXCL12P48061 93 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 ABCE1P61221 599 aaKnown RBP17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CRLF3Q8IUI8 442 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 SLC22A9Q8IVM8 553 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CAMKK1Q8N5S9 505 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 ASZ1Q8WWH4 475 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 DLG3Q92796 817 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 EDAQ92838 391 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 BIRC7Q96CA5 298 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 TRIM55Q9BYV6 548 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CYP4F12Q9HCS2 524 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CEP192Q8TEP8 1941 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CACNA1IQ9P0X4 2223 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 ITM2AO43736 263 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 POP7O75817 140 aaKnown RBP17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 IPO13O94829 963 aaKnown RBP17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 FSBPO95073 299 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 CEACAM5P06731 702 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 PREPP48147 710 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 NFKB2Q00653 900 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 PPP1R3AQ16821 1122 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 C6orf89Q6UWU4 347 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 GCNT7Q6ZNI0 430 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 TMEM145Q8NBT3 493 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 INVSQ9Y283 1065 aa17.8■□□□□ 0.44
SMARCD3-202ENST00000356800 ZFC3H1O60293 1989 aaKnown RBP17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SUPT3HB4E1H0 165 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 FPGTO14772 594 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SUPT3HO75486 399 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 HOXC4P09017 264 aaPredicted RBP17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 TPBGLP0DKB5 382 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SERPINB5P36952 375 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 NAGLUP54802 743 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 PFN3P60673 137 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 OVGP1Q12889 678 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 PLA2G4EQ3MJ16 856 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 TPRG1LQ5T0D9 272 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 ADAMTSL2Q86TH1 951 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 GPSM1Q86YR5 675 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 PPP4R1Q8TF05 950 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 PHF21BQ96EK2 531 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 TMEM237Q96Q45 408 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SORT1Q99523 831 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 IER2Q9BTL4 223 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 DRC3Q9H069 523 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 NPHS2Q9NP85 383 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 TM7SF3Q9NS93 570 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 NCKIPSDQ9NZQ3 722 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SLC23A2Q9UGH3 650 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SLC17A4Q9Y2C5 497 aa17.79■□□□□ 0.44
SMARCD3-202ENST00000356800 SMIM24O75264 130 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 LYPLA1O75608 230 aaPredicted RBP17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 SNUPNO95149 360 aaKnown RBP17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 MPC1LP0DKB6 136 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 PDHA2P29803 388 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 AKT2P31751 481 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 KIAA1024LP59773 190 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 ARHGAP8P85298 464 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 PHKG1Q16816 387 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 SYTL3Q4VX76 610 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 FAM83HQ6ZRV2 1179 aaPredicted RBP17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 NEK10Q6ZWH5 1172 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 LRRTM4Q86VH4 590 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 RASGRP3Q8IV61 690 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 OR2L2Q8NH16 312 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 C10orf82Q8WW14 230 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 GLMNQ92990 594 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 ORAI3Q9BRQ5 295 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 FAM126AQ9BYI3 521 aaPredicted RBP17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 NCOR1O75376 2440 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 LRP4O75096 1905 aa17.78■□□□□ 0.44
SMARCD3-202ENST00000356800 C17orf113A0A1B0GUU1 675 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 MGAT4DA6NG13 374 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 SYCE1LA8MT33 242 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 GPR89AB7ZAQ6 455 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 CACNB4O00305 520 aaPredicted RBP17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 GRID2O43424 1007 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 KLK8O60259 260 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 NPHS1O60500 1241 aa17.77■□□□□ 0.44
SMARCD3-202ENST00000356800 GSTM1P09488 218 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms