RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 KRT35Q92764 455 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 ULK4Q96C45 1275 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 C12orf66Q96MD2 445 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 CCM2Q9BSQ5 444 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 TWSG1Q9GZX9 223 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 WWP1Q9H0M0 922 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 LHX9Q9NQ69 397 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 FAM8A1Q9UBU6 413 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 CRLS1Q9UJA2 301 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 POLHQ9Y253 713 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 EFR3BQ9Y2G0 817 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 HEBP2Q9Y5Z4 205 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 MRPS18BQ9Y676 258 aaKnown RBP10.42□□□□□ -0.74
CAPN3-204ENST00000356316 CFAP20Q9Y6A4 193 aaKnown RBP10.42□□□□□ -0.74
CAPN3-204ENST00000356316 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
CAPN3-204ENST00000356316 MYO18BQ8IUG5 2567 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 BSNQ9UPA5 3926 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 CCDC66A2RUB6 948 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 CDC14CA4D256 554 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 GOLGA6L3A6NEY3 463 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 TLCD2A6NGC4 264 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 C21orf140B9A014 251 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 GPR39O43194 453 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 CREG1O75629 220 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 ZBTB11O95625 1053 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 RECKO95980 971 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 NTRK1P04629 796 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 RBP3P10745 1247 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 FOLR1P15328 257 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 F8A1P23610 371 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 NDUFS1P28331 727 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 HADHAP40939 763 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 CASRP41180 1078 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 RWDD2BP57060 319 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 TMPRSS15P98073 1019 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 OTUD4Q01804 1114 aaKnown RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 KCNAB1Q14722 419 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 PTPRCAPQ14761 206 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 SKIDA1Q1XH10 827 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 ATP1A1-AS1Q5TC04 95 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 SARM1Q6SZW1 724 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 TEX19Q8NA77 164 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 GPR150Q8NGU9 434 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 ACTL9Q8TC94 416 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 SLC41A2Q96JW4 573 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 ALS2CR12Q96Q35 445 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 INSM2Q96T92 566 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 MAP3K3Q99759 626 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 APOL2Q9BQE5 337 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 GPR87Q9BY21 358 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 OSBPL8Q9BZF1 889 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 C10orf88Q9H8K7 445 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 FGF21Q9NSA1 209 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 FEZ2Q9UHY8 353 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 TFR2Q9UP52 801 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 KCNMB2Q9Y691 235 aa10.41□□□□□ -0.74
CAPN3-204ENST00000356316 EPN1Q9Y6I3 576 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 FLNBO75369 2602 aaKnown RBP10.41□□□□□ -0.74
CAPN3-204ENST00000356316 UBR5O95071 2799 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-204ENST00000356316 OR6C74A6NCV1 312 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 GOLGA6L9A6NEM1 432 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 OR5K3A6NET4 321 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 IFRD1O00458 451 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-204ENST00000356316 SCRG1O75711 98 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 KLK3P07288 261 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-204ENST00000356316 EBLN1P0CF75 366 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 ATP1B2P14415 290 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-204ENST00000356316 ITGALP20701 1170 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 PPP1CAP62136 330 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 KLRB1Q12918 225 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 DNASE1L3Q13609 305 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 BCL7AQ4VC05 210 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 PWWP2BQ6NUJ5 590 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 TMTC1Q8IUR5 882 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 TMEM126BQ8IUX1 230 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 CARFQ8N187 725 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 OR4E2Q8NGC2 313 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 OR8K5Q8NH50 307 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 CT55Q8WUE5 264 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 LINC00615Q96LM1 132 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-204ENST00000356316 FERD3LQ96RJ6 166 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 COPS8Q99627 209 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 EPN3Q9H201 632 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 FAM96AQ9H5X1 160 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 VPS37BQ9H9H4 285 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 FANCEQ9HB96 536 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 KCND1Q9NSA2 647 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 SOHLH2Q9NX45 425 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 SEMA5BQ9P283 1151 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 SLC24A2Q9UI40 661 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 FKBPLQ9UIM3 349 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 MAN2B2Q9Y2E5 1009 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 PCDHGA6Q9Y5G7 932 aa10.4□□□□□ -0.74
CAPN3-204ENST00000356316 C17orf113A0A1B0GUU1 675 aa10.39□□□□□ -0.75
CAPN3-204ENST00000356316 MATN2O00339 956 aa10.39□□□□□ -0.75
CAPN3-204ENST00000356316 GAPDHSO14556 408 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-204ENST00000356316 CPNE3O75131 537 aaKnown RBP10.39□□□□□ -0.75
CAPN3-204ENST00000356316 RFPL1O75677 317 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms