RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 EPHX1P07099 455 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 NEK2P51955 445 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 CEACAM7Q14002 265 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 CPSF6Q16630 551 aaKnown RBP eCLIP17.32■□□□□ 0.36
NPAS3-202ENST00000356141 C6orf163Q5TEZ5 329 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 CERS6Q6ZMG9 384 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 GPRIN3Q6ZVF9 776 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 DCUN1D1Q96GG9 259 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 MAELQ96JY0 434 aaKnown RBP17.32■□□□□ 0.36
NPAS3-202ENST00000356141 YIPF3Q9GZM5 350 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 ZFP14Q9HCL3 533 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 SORCS3Q9UPU3 1222 aa17.32■□□□□ 0.36
NPAS3-202ENST00000356141 HELZP42694 1942 aaKnown RBP17.32■□□□□ 0.36
NPAS3-202ENST00000356141 ADH1CP00326 375 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 RPS17P08708 135 aaKnown RBP17.31■□□□□ 0.36
NPAS3-202ENST00000356141 HK2P52789 917 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 MRPS22P82650 360 aaKnown RBP17.31■□□□□ 0.36
NPAS3-202ENST00000356141 MS4A2Q01362 244 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 UBE3AQ05086 875 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 GTF2H2Q13888 395 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 CCNIQ14094 377 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 CCSMST1Q4G0I0 132 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 METTL21CQ5VZV1 264 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 GTF2H2CQ6P1K8 395 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 SLC22A15Q8IZD6 547 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 MYOCQ99972 504 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 ARPC5LQ9BPX5 153 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 SLC6A17Q9H1V8 727 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 ZNF385DQ9H6B1 395 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 HPS4Q9NQG7 708 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 KLQ9UEF7 1012 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 RNF11Q9Y3C5 154 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 TRIOBPQ9H2D6 2365 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 E7ENX8 843 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 MAGEC1O60732 1142 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 PSMD8P48556 350 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 RGS4P49798 205 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 NFKB2Q00653 900 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 ZNF234Q14588 700 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 LPCAT4Q643R3 524 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 REP15Q6BDI9 236 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 FBXL19Q6PCT2 694 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 IFNEQ86WN2 208 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 FUNDC1Q8IVP5 155 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 FNDC5Q8NAU1 212 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 FGF14Q92915 247 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 SMARCD2Q92925 531 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 RSRC1Q96IZ7 334 aaKnown RBP17.31■□□□□ 0.36
NPAS3-202ENST00000356141 RTKNQ9BST9 563 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 FAM126AQ9BYI3 521 aaPredicted RBP17.31■□□□□ 0.36
NPAS3-202ENST00000356141 ZDHHC3Q9NYG2 299 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 PCDHB1Q9Y5F3 818 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 SDK1Q7Z5N4 2213 aa17.31■□□□□ 0.36
NPAS3-202ENST00000356141 OR7A17O14581 309 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 NSG1P42857 185 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 CSNK1DP48730 415 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 ABRAXAS2Q15018 415 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 KANK2Q63ZY3 851 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 UBE2R2Q712K3 238 aaPredicted RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 AP2M1Q96CW1 435 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 CCDC28BQ9BUN5 200 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 DCLRE1BQ9H816 532 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 CHCHD3Q9NX63 227 aaKnown RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 SUN2Q9UH99 717 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 SLC8A2Q9UPR5 921 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 RWDD3Q9Y3V2 267 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 TSPAN6O43657 245 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 HOXB8P17481 243 aaPredicted RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 DGKAP23743 735 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 RANBP1P43487 201 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 RPL26P61254 145 aaKnown RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 STX1BP61266 288 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 UFM1P61960 85 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 TAF11Q15544 211 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 CRTC3Q6UUV7 619 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 PARM1Q6UWI2 310 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 VITQ6UXI7 678 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 RETREG3Q86VR2 466 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 FBXW8Q8N3Y1 598 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 RP9Q8TA86 221 aaKnown RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 PIP4K2CQ8TBX8 421 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 ISG20Q96AZ6 181 aaKnown RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 ARRDC3Q96B67 414 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 MCCC1Q96RQ3 725 aaPredicted RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 TMEM79Q9BSE2 394 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 PKD2L2Q9NZM6 624 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 LMCD1Q9NZU5 365 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 SLAMF8Q9P0V8 285 aa17.3■□□□□ 0.36
NPAS3-202ENST00000356141 RPL26L1Q9UNX3 145 aaKnown RBP17.3■□□□□ 0.36
NPAS3-202ENST00000356141 MSH3P20585 1137 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 PDHA2P29803 388 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 IL12RB1P42701 662 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 RPIAP49247 311 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 CCNG1P51959 295 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ERVK-21P61565 698 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 SF1Q15637 639 aaKnown RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ZXDCQ2QGD7 858 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 MUM1Q2TAK8 710 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 BNC2Q6ZN30 1099 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms