RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 OR6C1Q96RD1 312 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 TLR10Q9BXR5 811 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 OR52A5Q9H2C5 316 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 COG4Q9H9E3 785 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 AKIRIN1Q9H9L7 192 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 LZTFL1Q9NQ48 299 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 ZDHHC3Q9NYG2 299 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 SEMA5BQ9P283 1151 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 EPHA6Q9UF33 1036 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 SLC24A2Q9UI40 661 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 PCDHB11Q9Y5F2 797 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 KALRNO60229 2985 aa16.33■□□□□ 0.2
PDLIM7-201ENST00000355572 CCDC162PA2VCL2 907 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ARHGAP6O43182 974 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 RASSF9O75901 435 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ZIC2O95409 532 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 IFNB1P01574 187 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 PTMAP06454 111 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 FAM87AP0C7U9 286 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ATP1B2P14415 290 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ITGB6P18564 788 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 PREPP48147 710 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 NFKB2Q00653 900 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 C19orf57Q0VDD7 668 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 CEACAM20Q6UY09 585 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 CFAP46Q8IYW2 2715 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 IL22RA1Q8N6P7 574 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 HM13Q8TCT9 377 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ULK4Q96C45 1275 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ZNF514Q96K75 400 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 COPS8Q99627 209 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 ASPSCR1Q9BZE9 553 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 RAB33BQ9H082 229 aa16.32■□□□□ 0.2
PDLIM7-201ENST00000355572 CCDC88CQ9P219 2028 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 OR5K3A6NET4 321 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 POLR1CO15160 346 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 NKX2-8O15522 239 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 KRT86O43790 486 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 PLA2G2AP14555 144 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 NELFEP18615 380 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 RPL22P35268 128 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 HADHAP40939 763 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 KPNA2P52292 529 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 ZNF534Q76KX8 674 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 TAS2R42Q7RTR8 314 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 LRRC8AQ8IWT6 810 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 RBM12BQ8IXT5 1001 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 NLGN4XQ8N0W4 816 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 PHC3Q8NDX5 983 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 NLGN4YQ8NFZ3 816 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 STYXQ8WUJ0 223 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 SLC41A2Q96JW4 573 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 TEFMQ96QE5 360 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 C19orf43Q9BQ61 176 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 TSGA10Q9BZW7 698 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 FEZ2Q9UHY8 353 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 PCSK5Q92824 1860 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 PIEZO2Q9H5I5 2752 aa16.31■□□□□ 0.2
PDLIM7-201ENST00000355572 OR6C74A6NCV1 312 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 TERTO14746 1132 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 OR1I1O60431 355 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 SUN1O94901 812 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 EBLN1P0CF75 366 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 TPBGLP0DKB5 382 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 MSNP26038 577 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 OAS2P29728 719 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 KCNJ1P48048 391 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 GSDMDP57764 484 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 PDE1BQ01064 536 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 SEMA5AQ13591 1074 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 PLCL1Q15111 1095 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 RPS6KA1Q15418 735 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 TXLNBQ8N3L3 684 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 LKAAEAR1Q8TD35 194 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 MED8Q96G25 268 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 DCUN1D1Q96GG9 259 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 PPP1R2P1Q96PQ5 205 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 KIR3DX1Q9H7L2 352 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 CASS4Q9NQ75 786 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 RAB6BQ9NRW1 208 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 ZNF148Q9UQR1 794 aa16.3■□□□□ 0.2
PDLIM7-201ENST00000355572 BTN3A3O00478 584 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 TOX3O15405 576 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 GOT2P00505 430 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 FGF5P12034 268 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 POLR2CP19387 275 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 CXCR5P32302 372 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 STAT5AP42229 794 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 CRADDP78560 199 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 CACNG1Q06432 222 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 BRD3Q15059 726 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 GPR33Q49SQ1 333 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 TSTD2Q5T7W7 516 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 PRAMEF17Q5VTA0 474 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms