RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 MTPNP58546 118 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 ERVK-8P63133 956 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 DPY19L1Q2PZI1 675 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PAMR1Q6UXH9 720 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PIGKQ92643 395 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 PCDHGB3Q9Y5G1 929 aa12.56□□□□□ -0.4
SYNCRIP-201ENST00000355238 H0YGN5 161 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 C4BPAP04003 597 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 PTPN9P43378 593 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ABRQ12979 859 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM171A1Q5VUB5 890 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ELMOD2Q8IZ81 293 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 C12orf29Q8N999 325 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 INO80EQ8NBZ0 244 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 CREB3L1Q96BA8 519 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 GPR21Q99679 349 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 PRKAB1Q9Y478 270 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 NFS1Q9Y697 457 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 AURKAO14965 403 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 CSTF2P33240 577 aaKnown RBP eCLIP12.55□□□□□ -0.44e-7■■■■■ 32.6
SYNCRIP-201ENST00000355238 RPL19P84098 196 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 SMARCB1Q12824 385 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 TOMM5Q8N4H5 51 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRUB1Q8WWH5 349 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 AGO3Q9H9G7 860 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 HPF1Q9NWY4 346 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 IKZF2Q9UKS7 526 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 CHRNB2P17787 502 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 C1orf167Q5SNV9 1468 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZDHHC20Q5W0Z9 365 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 CAPN13Q6MZZ7 669 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 DOK6Q6PKX4 331 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 COLGALT2Q8IYK4 626 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 UROC1Q96N76 676 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ERVK-11Q9UQG0 969 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 DERAQ9Y315 318 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR10H1Q9Y4A9 318 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 SPIN1Q9Y657 262 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 RSL1D1O76021 490 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 PAPSS2O95340 614 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 NPR2P20594 1047 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF311Q5JNZ3 666 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 QSOX2Q6ZRP7 698 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 OTOP3Q7RTS5 596 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 CRYBG2Q8N1P7 616 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 AP2M1Q96CW1 435 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 FCRL2Q96LA5 508 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 RBM47A0AV96 593 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 B4GALT4O60513 344 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR4F21O95013 312 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 MSL3P1P0C860 447 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ADAM8P78325 824 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 LARS2Q15031 903 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 JAZF1Q86VZ6 243 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 TOP6BLQ8N6T0 577 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 TSEN15Q8WW01 171 aaKnown RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAXDC2Q96IV6 333 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 RDH12Q96NR8 316 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 KLHL5Q96PQ7 755 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF717Q9BY31 904 aaPredicted RBP12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 RHBGQ9H310 441 aa12.55□□□□□ -0.4
SYNCRIP-201ENST00000355238 L7N2F9 121 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ACSL4O60488 711 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 PRH1P02810 166 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 SAGP10523 405 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 BTN3A2P78410 334 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 C1orf189Q5VU69 101 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMEM192Q8IY95 271 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF285Q96NJ3 590 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 C1QTNF7Q9BXJ2 289 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ST6GALNAC4Q9H4F1 302 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 C1orf109Q9NX04 203 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 MTMR10Q9NXD2 777 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FKBP7Q9Y680 259 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR10H2O60403 315 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLITRK5O94991 958 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM174BQ3ZCQ3 159 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRMT10BQ6PF06 316 aaKnown RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 EPGNQ6UW88 154 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FRRS1Q6ZNA5 592 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR10G2Q8NGC3 310 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 COL21A1Q96P44 957 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMEM27Q9HBJ8 222 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 FBXO9Q9UK97 447 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 POFUT2Q9Y2G5 429 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 BOLA2-SMG1P6H3BVE0 249 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 TMEM63AO94886 807 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ANXA4P09525 319 aaPredicted RBP12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 NMBRP28336 390 aa12.54□□□□□ -0.4
SYNCRIP-201ENST00000355238 ARCN1P48444 511 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms