RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LRRC3Q9BY71 257 aa21.91■■□□□ 1.1
NKX2-1-201ENST00000354822 LATS2Q9NRM7 1088 aa21.91■■□□□ 1.1
NKX2-1-201ENST00000354822 TMEM39AQ9NV64 488 aa21.91■■□□□ 1.1
NKX2-1-201ENST00000354822 ATP11BQ9Y2G3 1177 aa21.91■■□□□ 1.1
NKX2-1-201ENST00000354822 INPP4BO15327 924 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 H6PDO95479 791 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 CASP2P42575 452 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 SLC7A9P82251 487 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 TRAF3Q13114 568 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 MAD2L1Q13257 205 aaPredicted RBP21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 DYNC1I2Q13409 638 aaKnown RBP21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 AP5B1Q2VPB7 878 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 FUT11Q495W5 492 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 IFNEQ86WN2 208 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 GALNT13Q8IUC8 556 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 TBC1D21Q8IYX1 336 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 TFAP2CQ92754 450 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 CD244Q9BZW8 370 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 NSUN3Q9H649 340 aaKnown RBP21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 RDH14Q9HBH5 336 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 DUS2Q9NX74 493 aaKnown RBP21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 ANGPTL3Q9Y5C1 460 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 LTBP2Q14767 1821 aa21.9■■□□□ 1.1
NKX2-1-201ENST00000354822 ABHD14A-ACY1A0A1B0GW23 586 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 SOCS2O14508 198 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 TAPBPO15533 448 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 ATP6V1B1P15313 513 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 YBX1P67809 324 aaKnown RBP21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 NADK2Q4G0N4 442 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 CYP20A1Q6UW02 462 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 EGFL8Q99944 293 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 SH3GL3Q99963 347 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 C17orf80Q9BSJ5 609 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 KLHL42Q9P2K6 505 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 MYRFQ9Y2G1 1151 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 PRSS21Q9Y6M0 314 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 ANKRD12Q6UB98 2062 aa21.89■■□□□ 1.1
NKX2-1-201ENST00000354822 RGS14O43566 566 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 G6PDP11413 515 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 ITGB6P18564 788 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 JAK1P23458 1154 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 CALRP27797 417 aaKnown RBP21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 GABRR2P28476 465 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 HSPA7P48741 367 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 LMAN2Q12907 356 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 CHRNA6Q15825 494 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 C18orf21Q32NC0 220 aaPredicted RBP21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 TMTC4Q5T4D3 741 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 BORAQ6PGQ7 559 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 TSPAN14Q8NG11 270 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 OPTCQ9UBM4 332 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 ANAPC2Q9UJX6 822 aa21.89■■□□□ 1.09
NKX2-1-201ENST00000354822 TCRBV5S2A0A599 114 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 SLC28A1O00337 649 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 KATNA1O75449 491 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 WDR47O94967 919 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 GUCA1CO95843 209 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CKMP06732 381 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CBSLP0DN79 551 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 UGT1A6P19224 532 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 UGT1A1P22309 533 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 UGT1A4P22310 534 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 UGT1A3P35503 534 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 UGT1A5P35504 534 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CBSP35520 551 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 HTR6P50406 440 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CCT8P50990 548 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 SNRPD1P62314 119 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CREMQ03060 361 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 ABRAXAS2Q15018 415 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 PLEKHG6Q3KR16 790 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CMTR2Q8IYT2 770 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 NXPE1Q8N323 547 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CBR4Q8N4T8 237 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 FIBCD1Q8N539 461 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CLDN19Q8N6F1 224 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 METTL25Q8N6Q8 603 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 OR2AP1Q8NGE2 309 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 UBTD2Q8WUN7 234 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 ISG20Q96AZ6 181 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 SLAMF8Q9P0V8 285 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 THEGQ9P2T0 379 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 EIF3LQ9Y262 564 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 ARHGAP10A1A4S6 786 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 EME2A4GXA9 379 aaPredicted RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 AGAP14A8MT82 685 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CNPP09543 421 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 NSG1P42857 185 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 LSAMPQ13449 338 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 TTC23LQ6PF05 361 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 RBM44Q6ZP01 1051 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 TPGS1Q6ZTW0 290 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 LKAAEAR1Q8TD35 194 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 RHBDF1Q96CC6 855 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 ELOVL2Q9NXB9 296 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 WWOXQ9NZC7 414 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 CFAP97Q9P2B7 532 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 ZMYM5Q9UJ78 669 aa21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 TSR3Q9UJK0 312 aaKnown RBP21.88■■□□□ 1.09
NKX2-1-201ENST00000354822 PCDHB3Q9Y5E6 796 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms