RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 IL26Q9NPH9 171 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 ELOVL2Q9NXB9 296 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 CEPT1Q9Y6K0 416 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 CCDC160A6NGH7 325 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 TAPBPO15533 448 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 ACRV1P26436 265 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 MERTKQ12866 999 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 RAB33AQ14088 237 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 SLC36A3Q495N2 470 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 LYPLAL1Q5VWZ2 237 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.78■■□□□ 1.08
UPF3A-201ENST00000351487 APCDD1Q8J025 514 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 OR6K2Q8NGY2 324 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 EVLQ9UI08 416 aaPredicted RBP21.78■■□□□ 1.08
UPF3A-201ENST00000351487 MAGEL2Q9UJ55 1249 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 PCDHB3Q9Y5E6 796 aa21.78■■□□□ 1.08
UPF3A-201ENST00000351487 PRRG1O14668 218 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 CNPP09543 421 aaKnown RBP21.77■■□□□ 1.08
UPF3A-201ENST00000351487 CDH2P19022 906 aaPredicted RBP21.77■■□□□ 1.08
UPF3A-201ENST00000351487 HMOX2P30519 316 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 BCL2L1Q07817 233 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 ABRAXAS2Q15018 415 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 AP5B1Q2VPB7 878 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 TRIML2Q8N7C3 387 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 UBTD2Q8WUN7 234 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 ACDQ96AP0 544 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 PPP3R2Q96LZ3 170 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 CREBZFQ9NS37 354 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 PRSS21Q9Y6M0 314 aa21.77■■□□□ 1.08
UPF3A-201ENST00000351487 RNF103-CHMP3A0A140T963 221 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 TRIM64CA6NLI5 447 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 SMAD6O43541 496 aaKnown RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 PQBP1O60828 265 aaKnown RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 NELFEP18615 380 aaKnown RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 HSPA7P48741 367 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 SMU1Q2TAY7 513 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 METTL2BQ6P1Q9 378 aaKnown RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 MACC1Q6ZN28 852 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 MILR1Q7Z6M3 343 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 ARL14EPQ8N8R7 260 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 TNIP2Q8NFZ5 429 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 HBEGFQ99075 208 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 HERC2P3Q9BVR0 1158 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 ZNF334Q9HCZ1 680 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 CD320Q9NPF0 282 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 ZNF639Q9UID6 485 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 TSR3Q9UJK0 312 aaKnown RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 POLR3HQ9Y535 204 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 CPQQ9Y646 472 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 DENND4CQ5VZ89 1909 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 TRIM64A6NGJ6 449 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 SLC25A14O95258 325 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 PARNO95453 639 aaKnown RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 CCL23P55773 120 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 OR4D2P58180 307 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 RFTN2Q52LD8 501 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 GPRC6AQ5T6X5 926 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 GALNT13Q8IUC8 556 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 TCEAL8Q8IYN2 117 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 ZBTB2Q8N680 514 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 OSCP1Q8WVF1 389 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 CGREF1Q99674 301 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 HTATIP2Q9BUP3 242 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 IL21Q9HBE4 155 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 TUBA8Q9NY65 449 aaPredicted RBP21.76■■□□□ 1.07
UPF3A-201ENST00000351487 USP22Q9UPT9 525 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 NEUROG3Q9Y4Z2 214 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 INSL5Q9Y5Q6 135 aa21.76■■□□□ 1.07
UPF3A-201ENST00000351487 BMP10O95393 424 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 GNAO1P09471 354 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 SPATA31D3P0C874 917 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 BPIP17213 487 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 VARSP26640 1264 aaKnown RBP21.75■■□□□ 1.07
UPF3A-201ENST00000351487 EPHB3P54753 998 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 KIAA0040Q15053 153 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 GPR33Q49SQ1 333 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 AP1ARQ63HQ0 302 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 SPATA31D4Q6ZUB0 917 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 BIRC7Q96CA5 298 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 C17orf80Q9BSJ5 609 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 HIPK3Q9H422 1215 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 GLYATL1P3A0A0U1RQE8 302 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 EI24O14681 340 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 KATNA1O75449 491 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 GUCA1CO95843 209 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 LDLRP01130 860 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 BMP1P13497 986 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 ITGB6P18564 788 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 HNF1BP35680 557 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 PWP1Q13610 501 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 CRY1Q16526 586 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 PHKG1Q16816 387 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 SULT1C3Q6IMI6 304 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 CBARPQ8N350 705 aaPredicted RBP21.75■■□□□ 1.07
UPF3A-201ENST00000351487 CLDN19Q8N6F1 224 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 OR8J3Q8NGG0 315 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 BPIFB1Q8TDL5 484 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 CD244Q9BZW8 370 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 RDH14Q9HBH5 336 aa21.75■■□□□ 1.07
UPF3A-201ENST00000351487 CROCCQ5TZA2 2017 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms