RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 PFDN4Q9NQP4 134 aa23.31■■□□□ 1.32
USP25-203ENST00000351097 GALPQ9UBC7 116 aa23.31■■□□□ 1.32
USP25-203ENST00000351097 TRMT6Q9UJA5 497 aaKnown RBP23.31■■□□□ 1.32
USP25-203ENST00000351097 FNDC3AQ9Y2H6 1198 aaKnown RBP23.31■■□□□ 1.32
USP25-203ENST00000351097 NCF1BA6NI72 391 aaPredicted RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 NCF1CA8MVU1 366 aaPredicted RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 PLOD2O00469 737 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 PFDN6O15212 129 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 GPIP06744 558 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 SRCP12931 536 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 NCF1P14598 390 aaPredicted RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 NELFEP18615 380 aaKnown RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 PRDX3P30048 256 aaKnown RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 HMGCLP35914 325 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 MAPK8P45983 427 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 ALDH3B2P48448 385 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 YBX1P67809 324 aaKnown RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 TUBA4AP68366 448 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 FUT11Q495W5 492 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 ASTLQ6HA08 431 aaPredicted RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 SLC30A3Q99726 388 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 HGH1Q9BTY7 390 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 TMCO1Q9UM00 188 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 ANKRD33BA6NCL7 494 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 H3BSA7 217 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 CDH2P19022 906 aaPredicted RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 TTPAP49638 278 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 PLOD1Q02809 727 aaPredicted RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 RBBP7Q16576 425 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 PRSS36Q5K4E3 855 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 EPHX4Q8IUS5 362 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 OR2AP1Q8NGE2 309 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 OR56A4Q8NGH8 313 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 VOPP1Q96AW1 172 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 GPR63Q9BZJ6 419 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 BRINP2Q9C0B6 783 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 CLK4Q9HAZ1 481 aaKnown RBP23.3■■□□□ 1.32
USP25-203ENST00000351097 ZNF225Q9UK10 706 aa23.3■■□□□ 1.32
USP25-203ENST00000351097 SNX2O60749 519 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 EEDO75530 441 aaKnown RBP23.29■■□□□ 1.32
USP25-203ENST00000351097 TSPAN12O95859 305 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 IGSF6O95976 241 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 CD9P21926 228 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 GSK3BP49841 420 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 ZRANB3Q5FWF4 1079 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 ZNF697Q5TEC3 545 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 FAM47BQ8NA70 645 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 VPS33AQ96AX1 596 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 CENPNQ96H22 339 aaPredicted RBP23.29■■□□□ 1.32
USP25-203ENST00000351097 TEX37Q96LM6 180 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 C9orf16Q9BUW7 83 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 LINC00597Q9H2U6 94 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 ALG2Q9H553 416 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 SLC8A2Q9UPR5 921 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 PKP3Q9Y446 797 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 HCFC2Q9Y5Z7 792 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 MYO7AQ13402 2215 aa23.29■■□□□ 1.32
USP25-203ENST00000351097 CXorf51AA0A1B0GTR3 108 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 ASPDHA6ND91 283 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 NEDD8-MDP1E9PL57 170 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 GIPC1O14908 333 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 SOCS5O75159 536 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 NIPSNAP2O75323 286 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 SLC22A3O75751 556 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 HNRNPA1P09651 372 aaKnown RBP eCLIP23.28■■□□□ 1.32
USP25-203ENST00000351097 FCGR1AP12314 374 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 OXTRP30559 389 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 PDCD4Q53EL6 469 aaKnown RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 PTRH1Q86Y79 214 aaKnown RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 SIDT2Q8NBJ9 832 aaKnown RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 TRPV3Q8NET8 790 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 DNAJB14Q8TBM8 379 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 ZSWIM3Q96MP5 696 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 HS3ST2Q9Y278 367 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 GBF1Q92538 1859 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 NOTCH4Q99466 2003 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 PER2O15055 1255 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 OR1I1O60431 355 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 TPST1O60507 370 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 XYLBO75191 536 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 TRBC1P01850 177 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 UGT1A6P19224 532 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 ZFP36L2P47974 494 aaKnown RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 IL2P60568 153 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 ZNF77Q15935 545 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 UGT3A1Q6NUS8 523 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 GPRIN3Q6ZVF9 776 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 GRASPQ7Z6J2 395 aaPredicted RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 GPSM1Q86YR5 675 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 LEMD2Q8NC56 503 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 LINGO1Q96FE5 620 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 KCTD14Q9BQ13 255 aaPredicted RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 BBS2Q9BXC9 721 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 ATP13A3Q9H7F0 1226 aa23.28■■□□□ 1.32
USP25-203ENST00000351097 LEF1Q9UJU2 399 aaPredicted RBP23.28■■□□□ 1.32
USP25-203ENST00000351097 FAM149AA5PLN7 773 aa23.27■■□□□ 1.32
USP25-203ENST00000351097 CCDC154A6NI56 674 aa23.27■■□□□ 1.32
USP25-203ENST00000351097 DLGAP1O14490 977 aa23.27■■□□□ 1.32
USP25-203ENST00000351097 GPR39O43194 453 aa23.27■■□□□ 1.32
USP25-203ENST00000351097 SLC5A2P31639 672 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms