RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 KCNJ1P48048 391 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 PPP1CAP62136 330 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 MC2RQ01718 297 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 C19orf57Q0VDD7 668 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 CDH17Q12864 832 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 GPR33Q49SQ1 333 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 ZNF658BQ4V348 819 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 TMEM164Q5U3C3 297 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 DRICH1Q6PGQ1 229 aaPredicted RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 PLXDC1Q8IUK5 500 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 RBM12BQ8IXT5 1001 aaKnown RBP14.11□□□□□ -0.15
HMGN3-202ENST00000344726 OR13J1Q8NGT2 312 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 DCUN1D1Q96GG9 259 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 C9orf72Q96LT7 481 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 RMDN2Q96LZ7 410 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 ZNF778Q96MU6 729 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 TGM7Q96PF1 710 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 GRPEL1Q9HAV7 217 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 CASS4Q9NQ75 786 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 SLC2A6Q9UGQ3 507 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 PILRAQ9UKJ1 303 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 COL6A6A6NMZ7 2263 aa14.11□□□□□ -0.15
HMGN3-202ENST00000344726 CEP104O60308 925 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 ANKRD34CP0C6C1 535 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 LIFP15018 202 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 AMD1P17707 334 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 MSNP26038 577 aaKnown RBP14.1□□□□□ -0.15
HMGN3-202ENST00000344726 FOXN2P32314 431 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 DBN1Q16643 649 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 DCAF12Q5T6F0 453 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 TAS2R42Q7RTR8 314 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 TIPARPQ7Z3E1 657 aaKnown RBP14.1□□□□□ -0.15
HMGN3-202ENST00000344726 CFAP206Q8IYR0 622 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 CLDN19Q8N6F1 224 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 CCDC89Q8N998 374 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 DNAAF3Q8N9W5 541 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 EXTL1Q92935 676 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 C12orf66Q96MD2 445 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 IMP3Q9NV31 184 aaKnown RBP14.1□□□□□ -0.15
HMGN3-202ENST00000344726 PAK5Q9P286 719 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 DRG1Q9Y295 367 aaKnown RBP14.1□□□□□ -0.15
HMGN3-202ENST00000344726 PRSS21Q9Y6M0 314 aa14.1□□□□□ -0.15
HMGN3-202ENST00000344726 CCDC162PA2VCL2 907 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 CFAP99D6REC4 459 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 E7EVH7 732 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 RAD1O60671 282 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 POLBP06746 335 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 APRTP07741 180 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 RALBP11234 206 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 LMAN1P49257 510 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 RAB15P59190 212 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 SH3BP2P78314 561 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 CACNG1Q06432 222 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 TSTD2Q5T7W7 516 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 CAPRIN2Q6IMN6 1127 aaKnown RBP14.09□□□□□ -0.15
HMGN3-202ENST00000344726 PPP1R21Q6ZMI0 780 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 PRELID2Q8N945 189 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 HM13Q8TCT9 377 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 HEXDCQ8WVB3 486 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 RANBP9Q96S59 729 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 SLC12A9Q9BXP2 914 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 ASPSCR1Q9BZE9 553 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 FBXO8Q9NRD0 319 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 EPHA6Q9UF33 1036 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 ACSL5Q9ULC5 683 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 PCDHB11Q9Y5F2 797 aa14.09□□□□□ -0.15
HMGN3-202ENST00000344726 C17orf113A0A1B0GUU1 675 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 HEATR9A2RTY3 570 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 KLHL33A6NCF5 533 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 PLA2G2AP14555 144 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 ZNF28P17035 718 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 PDHA2P29803 388 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 SEPHS1P49903 392 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 ACVR1Q04771 509 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 SKIDA1Q1XH10 827 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 IRGCQ6NXR0 463 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 FAM92BQ6ZTR7 304 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 ZNF534Q76KX8 674 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 PRSS42Q7Z5A4 293 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 CACNA2D3Q8IZS8 1091 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 HDAC10Q969S8 669 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 NRTNQ99748 197 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 CCM2Q9BSQ5 444 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 RAB33BQ9H082 229 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 OR52A5Q9H2C5 316 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 ZNF768Q9H5H4 540 aaKnown RBP14.08□□□□□ -0.16
HMGN3-202ENST00000344726 COG4Q9H9E3 785 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 TCAF1Q9Y4C2 921 aa14.08□□□□□ -0.16
HMGN3-202ENST00000344726 LOC101059948A0A1B0GTJ6 334 aa14.07□□□□□ -0.16
HMGN3-202ENST00000344726 TOX3O15405 576 aaPredicted RBP14.07□□□□□ -0.16
HMGN3-202ENST00000344726 NRDCO43847 1150 aa14.07□□□□□ -0.16
HMGN3-202ENST00000344726 DLGAP3O95886 979 aa14.07□□□□□ -0.16
HMGN3-202ENST00000344726 GOT2P00505 430 aaKnown RBP14.07□□□□□ -0.16
HMGN3-202ENST00000344726 SLC35G4P0C7Q5 338 aa14.07□□□□□ -0.16
HMGN3-202ENST00000344726 ADRA1DP25100 572 aa14.07□□□□□ -0.16
HMGN3-202ENST00000344726 PREPP48147 710 aa14.07□□□□□ -0.16
HMGN3-202ENST00000344726 CRADDP78560 199 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms