RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 STRA6Q9BX79 667 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 DCLRE1BQ9H816 532 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 ARMCX1Q9P291 453 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC9A8Q9Y2E8 581 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC1A2P43004 574 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 CLDN10P78369 228 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 CLCQ05315 142 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 INO80DQ53TQ3 878 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 NAPRTQ6XQN6 538 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC9B2Q86UD5 537 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 PCDHB3Q9Y5E6 796 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 POP7O75817 140 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 SEMA4FO95754 770 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 EPOP01588 193 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 CBSLP0DN79 551 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 CBSP35520 551 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 SUOXP51687 545 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC40A1Q9NP59 571 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 TSPAN6O43657 245 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 KHDRBS2Q5VWX1 349 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 LRRC66Q68CR7 880 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 IL22RA1Q8N6P7 574 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 TERB1Q8NA31 727 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 POMGNT2Q8NAT1 580 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 APOLD1Q96LR9 279 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 REEP1Q9H902 201 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 MAP2K7O14733 419 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 NRLP54845 237 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 ANKRD54Q6NXT1 300 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 TRIM74Q86UV6 250 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 TMEM59LQ9UK28 342 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 JUPP14923 745 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 HNMTP50135 292 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 CST6Q15828 149 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 PIK3R6Q5UE93 754 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 SCAIQ8N9R8 606 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 TSGA13Q96PP4 275 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 TFB2MQ9H5Q4 396 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 OSER1Q9NX31 292 aa16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 DNMT3BQ9UBC3 853 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-201ENST00000344626 SRRM3A6NNA2 597 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 KLK3P07288 261 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 UROSP10746 265 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 MAPK10P53779 464 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 BEND5Q7L4P6 421 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 TMEM173Q86WV6 379 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 DENND6AQ8IWF6 608 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 UMODL1-AS1Q8N2C9 162 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 MYLK2Q9H1R3 596 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 RNGTTO60942 597 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 FAM155BO75949 473 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 LRATO95237 230 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 ADHFE1Q8IWW8 467 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 ADGRG2Q8IZP9 1017 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 DPP10Q8N608 796 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 REXO5Q96IC2 774 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 PIWIL1Q96J94 861 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 SUCOQ9UBS9 1254 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 FETUBQ9UGM5 382 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 MID1O15344 667 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 B3GALT2O43825 422 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 SDC3O75056 442 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 CLK1P49759 484 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 MAPK12P53778 367 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 SHKBP1Q8TBC3 707 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 ADAMTS15Q8TE58 950 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 UTP15Q8TED0 518 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 KIAA1143Q96AT1 154 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 COX4I1P13073 169 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 JUNDP17535 347 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 ELOCQ15369 112 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 TXNRD3NBQ6F5E7 133 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 FAM171BQ6P995 826 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 GCNT7Q6ZNI0 430 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 ZNF598Q86UK7 904 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 DLG3Q92796 817 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 IGSF8Q969P0 613 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 MCMBPQ9BTE3 642 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 BRINP2Q9C0B6 783 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 KLHL25Q9H0H3 589 aa16.15■□□□□ 0.18
SMARCA4-201ENST00000344626 H3BN98 237 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 AP3D1O14617 1153 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 ACADSP16219 412 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 AGXTP21549 392 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 MASP1P48740 699 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 TCEAL1Q15170 157 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 TANGO2Q6ICL3 276 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 ADCK1Q86TW2 530 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 TDRPQ86YL5 185 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 DENND1AQ8TEH3 1009 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 SLCO2A1Q92959 643 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 C19orf60Q96EN9 201 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 MTG2Q9H4K7 406 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 ANAPC2Q9UJX6 822 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 DUSP12Q9UNI6 340 aa16.14■□□□□ 0.18
SMARCA4-201ENST00000344626 BBIP1A8MTZ0 92 aa16.14■□□□□ 0.17
SMARCA4-201ENST00000344626 PEX19P40855 299 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms