RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MSTO1Q9BUK6 570 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 HTATIP2Q9BUP3 242 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SNRNP25Q9BV90 132 aaKnown RBP8.02□□□□□ -1.13
ATG4A-201ENST00000343524 UCK2Q9BZX2 261 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 AMBRA1Q9C0C7 1298 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 SERHL2Q9H4I8 314 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 IFT22Q9H7X7 185 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 KCNH7Q9NS40 1196 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 ERVK-18Q9QC07 812 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 GTF2IRD1Q9UHL9 959 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 CPSF3Q9UKF6 684 aaKnown RBP8.02□□□□□ -1.13
ATG4A-201ENST00000343524 RNF6Q9Y252 685 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 FIS1Q9Y3D6 152 aa8.02□□□□□ -1.13
ATG4A-201ENST00000343524 A0A075B6Q4 140 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ZCWPW2A0A1B0GU75 182 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 A0A1W2PRG6 482 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 OR6C70A6NIJ9 312 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 INO80B-WBP1J3KQ70 363 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TFECO14948 347 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 FAM20BO75063 409 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TNNC2P02585 160 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 MT-ND2P03891 347 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 SERPINF2P08697 491 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CAPN3P20807 821 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 F8A1P23610 371 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PIK3CBP42338 1070 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 GLRBP48167 497 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 SLC12A2P55011 1212 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PIGFQ07326 219 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 NFE2L1Q14494 772 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TAB1Q15750 504 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TBCEQ15813 527 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 FAM182AQ5T1J6 154 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 GLYATQ6IB77 296 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CAPN13Q6MZZ7 669 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TIGD7Q6NT04 549 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 SCYL2Q6P3W7 929 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 SPATA19Q7Z5L4 167 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 NRARPQ7Z6K4 114 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 RAB44Q7Z6P3 723 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 RBM23Q86U06 439 aaKnown RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CENPLQ8N0S6 344 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 OR8H2Q8N162 312 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ZNF540Q8NDQ6 660 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TTLQ8NG68 377 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TFAP2BQ92481 460 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 FRMD6Q96NE9 622 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CCDC115Q96NT0 180 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 OR2A14Q96R47 310 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ALOXE3Q9BYJ1 711 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 FAM124BQ9H5Z6 455 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 MAGIXQ9H6Y5 334 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CCSER2Q9H7U1 834 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ERVMER34-1Q9H9K5 563 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ZBTB20Q9HC78 741 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 AGO4Q9HCK5 861 aaKnown RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 RANGRFQ9HD47 186 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CHST12Q9NRB3 414 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 SDR39U1Q9NRG7 319 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 FARSBQ9NSD9 589 aaKnown RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 GGA3Q9NZ52 723 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRR12Q9ULL5 1215 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 SNX6Q9UNH7 406 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 KLHL20Q9Y2M5 609 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 H3BQ06 376 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TOR1AO14656 332 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRMT5O14744 637 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 HS6ST1O60243 411 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 RAD17O75943 681 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CDK14O94921 469 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 AP2A1O95782 977 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 WDPCPO95876 746 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CST1P01037 141 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CYP2A6P11509 494 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 LBPP18428 481 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CD72P21854 359 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 BMP8BP34820 402 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ARL4AP40617 200 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ACOT2P49753 483 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRR20EP86478 221 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRR20CP86479 221 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRR20DP86480 221 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRR20BP86481 221 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PRR20AP86496 221 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ELP6Q0PNE2 266 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ORC1Q13415 861 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 ASAH1Q13510 395 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 EFR3AQ14156 821 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 GALEQ14376 348 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CAPRIN1Q14444 709 aaKnown RBP8.01□□□□□ -1.13
ATG4A-201ENST00000343524 QPRTQ15274 297 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 STK11Q15831 433 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 PPP1R3AQ16821 1122 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 CRY2Q49AN0 593 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 VPS26BQ4G0F5 336 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 KLHL12Q53G59 568 aa8.01□□□□□ -1.13
ATG4A-201ENST00000343524 TSTD2Q5T7W7 516 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms