RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 AVILO75366 819 aa15.07■□□□□ 0
VAPA-201ENST00000340541 VIPP01282 170 aa15.07■□□□□ 0
VAPA-201ENST00000340541 NMBRP28336 390 aa15.07■□□□□ 0
VAPA-201ENST00000340541 SLC5A2P31639 672 aa15.07■□□□□ 0
VAPA-201ENST00000340541 LIMK2P53671 638 aa15.07■□□□□ 0
VAPA-201ENST00000340541 TERF1P54274 439 aa15.07■□□□□ 0
VAPA-201ENST00000340541 ITIH4Q14624 930 aa15.07■□□□□ 0
VAPA-201ENST00000340541 C16orf72Q14CZ0 275 aa15.07■□□□□ 0
VAPA-201ENST00000340541 RPE65Q16518 533 aa15.07■□□□□ 0
VAPA-201ENST00000340541 AFTPHQ6ULP2 937 aa15.07■□□□□ 0
VAPA-201ENST00000340541 PACS1Q6VY07 963 aa15.07■□□□□ 0
VAPA-201ENST00000340541 CAND1Q86VP6 1230 aaKnown RBP15.07■□□□□ 0
VAPA-201ENST00000340541 C17orf53Q8N3J3 647 aaPredicted RBP15.07■□□□□ 0
VAPA-201ENST00000340541 OR4D9Q8NGE8 314 aa15.07■□□□□ 0
VAPA-201ENST00000340541 GPR150Q8NGU9 434 aa15.07■□□□□ 0
VAPA-201ENST00000340541 OR4L1Q8NH43 312 aa15.07■□□□□ 0
VAPA-201ENST00000340541 OR10G6Q8NH81 332 aa15.07■□□□□ 0
VAPA-201ENST00000340541 SLCO2A1Q92959 643 aa15.07■□□□□ 0
VAPA-201ENST00000340541 KIFC1Q9BW19 673 aa15.07■□□□□ 0
VAPA-201ENST00000340541 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.07■□□□□ 0
VAPA-201ENST00000340541 DDX47Q9H0S4 455 aaKnown RBP15.07■□□□□ 0
VAPA-201ENST00000340541 SYBUQ9NX95 663 aa15.07■□□□□ 0
VAPA-201ENST00000340541 BFARQ9NZS9 450 aa15.07■□□□□ 0
VAPA-201ENST00000340541 OGFRQ9NZT2 677 aa15.07■□□□□ 0
VAPA-201ENST00000340541 PRSS21Q9Y6M0 314 aa15.07■□□□□ 0
VAPA-201ENST00000340541 C17orf113A0A1B0GUU1 675 aa15.06■□□□□ 0
VAPA-201ENST00000340541 DUX1O43812 170 aa15.06■□□□□ 0
VAPA-201ENST00000340541 AP2A2O94973 939 aa15.06■□□□□ 0
VAPA-201ENST00000340541 THRAP10827 490 aa15.06■□□□□ 0
VAPA-201ENST00000340541 HGFP14210 728 aa15.06■□□□□ 0
VAPA-201ENST00000340541 ARNTP27540 789 aa15.06■□□□□ 0
VAPA-201ENST00000340541 PTGIRP43119 386 aa15.06■□□□□ 0
VAPA-201ENST00000340541 GPR18Q14330 331 aa15.06■□□□□ 0
VAPA-201ENST00000340541 PHF19Q5T6S3 580 aa15.06■□□□□ 0
VAPA-201ENST00000340541 TMEM71Q6P5X7 295 aa15.06■□□□□ 0
VAPA-201ENST00000340541 WDR74Q6RFH5 385 aaPredicted RBP15.06■□□□□ 0
VAPA-201ENST00000340541 TRIM48Q8IWZ4 208 aa15.06■□□□□ 0
VAPA-201ENST00000340541 MCUQ8NE86 351 aa15.06■□□□□ 0
VAPA-201ENST00000340541 SPDYE1Q8NFV5 336 aaPredicted RBP15.06■□□□□ 0
VAPA-201ENST00000340541 HM13Q8TCT9 377 aa15.06■□□□□ 0
VAPA-201ENST00000340541 GRK7Q8WTQ7 553 aa15.06■□□□□ 0
VAPA-201ENST00000340541 CXorf40BQ96DE9 158 aa15.06■□□□□ 0
VAPA-201ENST00000340541 CAPZA3Q96KX2 299 aa15.06■□□□□ 0
VAPA-201ENST00000340541 CCDC74BQ96LY2 380 aa15.06■□□□□ 0
VAPA-201ENST00000340541 RMDN2Q96LZ7 410 aa15.06■□□□□ 0
VAPA-201ENST00000340541 INSM2Q96T92 566 aaPredicted RBP15.06■□□□□ 0
VAPA-201ENST00000340541 WWP1Q9H0M0 922 aa15.06■□□□□ 0
VAPA-201ENST00000340541 MRM3Q9HC36 420 aaKnown RBP15.06■□□□□ 0
VAPA-201ENST00000340541 MARCH4Q9P2E8 410 aaPredicted RBP15.06■□□□□ 0
VAPA-201ENST00000340541 FAM8A1Q9UBU6 413 aa15.06■□□□□ 0
VAPA-201ENST00000340541 PCYOX1Q9UHG3 505 aa15.06■□□□□ 0
VAPA-201ENST00000340541 ACSL5Q9ULC5 683 aa15.06■□□□□ 0
VAPA-201ENST00000340541 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
VAPA-201ENST00000340541 SAR1BQ9Y6B6 198 aa15.06■□□□□ 0
VAPA-201ENST00000340541 FLNBO75369 2602 aaKnown RBP15.05■□□□□ 0
VAPA-201ENST00000340541 SETXQ7Z333 2677 aaKnown RBP15.05■□□□□ 0
VAPA-201ENST00000340541 ASH1LQ9NR48 2969 aaKnown RBP15.05■□□□□ 0
VAPA-201ENST00000340541 CTAGE9A4FU28 777 aa15.05■□□□□ -0
VAPA-201ENST00000340541 OR1I1O60431 355 aa15.05■□□□□ -0
VAPA-201ENST00000340541 JMJD7P0C870 316 aa15.05■□□□□ -0
VAPA-201ENST00000340541 MTHFD1P11586 935 aaKnown RBP15.05■□□□□ -0
VAPA-201ENST00000340541 MLNP12872 115 aa15.05■□□□□ -0
VAPA-201ENST00000340541 MPSTP25325 297 aa15.05■□□□□ -0
VAPA-201ENST00000340541 ETV5P41161 510 aa15.05■□□□□ -0
VAPA-201ENST00000340541 HALP42357 657 aa15.05■□□□□ -0
VAPA-201ENST00000340541 NSG1P42857 185 aa15.05■□□□□ -0
VAPA-201ENST00000340541 MAGEA3P43357 314 aa15.05■□□□□ -0
VAPA-201ENST00000340541 PRAMEP78395 509 aa15.05■□□□□ -0
VAPA-201ENST00000340541 TRA2AQ13595 282 aaKnown RBP eCLIP15.05■□□□□ -0
VAPA-201ENST00000340541 CAPRIN2Q6IMN6 1127 aaKnown RBP15.05■□□□□ -0
VAPA-201ENST00000340541 CES3Q6UWW8 571 aa15.05■□□□□ -0
VAPA-201ENST00000340541 RBM12BQ8IXT5 1001 aaKnown RBP15.05■□□□□ -0
VAPA-201ENST00000340541 CFAP206Q8IYR0 622 aa15.05■□□□□ -0
VAPA-201ENST00000340541 AGGF1Q8N302 714 aaeCLIP15.05■□□□□ -0
VAPA-201ENST00000340541 MPP5Q8N3R9 675 aa15.05■□□□□ -0
VAPA-201ENST00000340541 NAT8LQ8N9F0 302 aa15.05■□□□□ -0
VAPA-201ENST00000340541 RCBTB1Q8NDN9 531 aa15.05■□□□□ -0
VAPA-201ENST00000340541 OR6P1Q8NGX9 317 aa15.05■□□□□ -0
VAPA-201ENST00000340541 MFSD3Q96ES6 412 aa15.05■□□□□ -0
VAPA-201ENST00000340541 AHCYL2Q96HN2 611 aaKnown RBP15.05■□□□□ -0
VAPA-201ENST00000340541 CMKLR1Q99788 373 aa15.05■□□□□ -0
VAPA-201ENST00000340541 DPYSL5Q9BPU6 564 aa15.05■□□□□ -0
VAPA-201ENST00000340541 CCM2Q9BSQ5 444 aa15.05■□□□□ -0
VAPA-201ENST00000340541 EPB41L1Q9H4G0 881 aa15.05■□□□□ -0
VAPA-201ENST00000340541 COG4Q9H9E3 785 aa15.05■□□□□ -0
VAPA-201ENST00000340541 SOX13Q9UN79 622 aa15.05■□□□□ -0
VAPA-201ENST00000340541 MN1Q10571 1320 aaPredicted RBP15.04■□□□□ -0
VAPA-201ENST00000340541 AGRPO00253 132 aa15.04■□□□□ -0
VAPA-201ENST00000340541 HGSO14964 777 aaPredicted RBP15.04■□□□□ -0
VAPA-201ENST00000340541 EFSO43281 561 aa15.04■□□□□ -0
VAPA-201ENST00000340541 POLBP06746 335 aa15.04■□□□□ -0
VAPA-201ENST00000340541 ITIH1P19827 911 aa15.04■□□□□ -0
VAPA-201ENST00000340541 CD82P27701 267 aa15.04■□□□□ -0
VAPA-201ENST00000340541 MAPK9P45984 424 aa15.04■□□□□ -0
VAPA-201ENST00000340541 PTK6Q13882 451 aa15.04■□□□□ -0
VAPA-201ENST00000340541 LY6DQ14210 128 aa15.04■□□□□ -0
VAPA-201ENST00000340541 LYPLAL1Q5VWZ2 237 aa15.04■□□□□ -0
VAPA-201ENST00000340541 ARMC3Q5W041 872 aa15.04■□□□□ -0
VAPA-201ENST00000340541 DUS1LQ6P1R4 473 aaKnown RBP15.04■□□□□ -0
VAPA-201ENST00000340541 CERS6Q6ZMG9 384 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms