RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 PACS1Q6VY07 963 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 ZFAND4Q86XD8 727 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 COG1Q8WTW3 980 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 MAGOHBQ96A72 148 aaKnown RBP14.28□□□□□ -0.12
ERCC1-203ENST00000340192 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 C9orf72Q96LT7 481 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 RMDN2Q96LZ7 410 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 OSBPL9Q96SU4 736 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 NAP1L3Q99457 506 aaPredicted RBP14.28□□□□□ -0.12
ERCC1-203ENST00000340192 CHRAC1Q9NRG0 131 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 WDR70Q9NW82 654 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 PCDHGA3Q9Y5H0 932 aa14.28□□□□□ -0.12
ERCC1-203ENST00000340192 TCRBV7S3A2A0A539 114 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 PGRMC1O00264 195 aaKnown RBP14.27□□□□□ -0.13
ERCC1-203ENST00000340192 ANKRD34CP0C6C1 535 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 LIPCP11150 499 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 TPSB2P20231 275 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 NSG1P42857 185 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 VPS41P49754 854 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 TERF1P54274 439 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 PRAMEP78395 509 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 ITIH4Q14624 930 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 GSE1Q14687 1217 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 PLCL1Q15111 1095 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 TPSAB1Q15661 275 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 PCID2Q5JVF3 399 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 LYPLAL1Q5VWZ2 237 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 CAPRIN2Q6IMN6 1127 aaKnown RBP14.27□□□□□ -0.13
ERCC1-203ENST00000340192 IRGCQ6NXR0 463 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 OR6P1Q8NGX9 317 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 OR4L1Q8NH43 312 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 PEX13Q92968 403 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.27□□□□□ -0.13
ERCC1-203ENST00000340192 ZDHHC12Q96GR4 267 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 DDA1Q9BW61 102 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 ASPSCR1Q9BZE9 553 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 IL22Q9GZX6 179 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 COG4Q9H9E3 785 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 B3GALT1Q9Y5Z6 326 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 PRSS21Q9Y6M0 314 aa14.27□□□□□ -0.13
ERCC1-203ENST00000340192 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 STMND1H3BQB6 276 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 AP3B1O00203 1094 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 QSOX1O00391 747 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 TOX3O15405 576 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 KIF1CO43896 1103 aaKnown RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 OR1I1O60431 355 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 RASSF9O75901 435 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 KRT14P02533 472 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 GSTM1P09488 218 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 CD82P27701 267 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 PDHA2P29803 388 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 COILP38432 576 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 PREPP48147 710 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 NPY2RP49146 381 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 RAB15P59190 212 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 PPP1CAP62136 330 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 CDK16Q00536 496 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 MC2RQ01718 297 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 GSTM4Q03013 218 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 GPS1Q13098 491 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 CYP1B1Q16678 543 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 FASTKD1Q53R41 847 aaKnown RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 DCAF12Q5T6F0 453 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 ARHGAP40Q5TG30 622 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 ANKS6Q68DC2 871 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 KLHL35Q6PF15 583 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 CCDC137Q6PK04 289 aaKnown RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 FAM92BQ6ZTR7 304 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 ZNF534Q76KX8 674 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 GPR155Q7Z3F1 870 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 DTX1Q86Y01 620 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 ACTRT1Q8TDG2 376 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 ZFPM2Q8WW38 1151 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 SGSM3Q96HU1 749 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 CCNL2Q96S94 520 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 TTC1Q99614 292 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 CTRCQ99895 268 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 RAB33BQ9H082 229 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 OR52A5Q9H2C5 316 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 ZNF768Q9H5H4 540 aaKnown RBP14.26□□□□□ -0.13
ERCC1-203ENST00000340192 KIR3DX1Q9H7L2 352 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 BFARQ9NZS9 450 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 EPHA6Q9UF33 1036 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 SLC24A2Q9UI40 661 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 SNX12Q9UMY4 172 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 COLEC10Q9Y6Z7 277 aa14.26□□□□□ -0.13
ERCC1-203ENST00000340192 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-203ENST00000340192 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-203ENST00000340192 ZNF185O15231 689 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 FTH1P02794 183 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 MGAT1P26572 445 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 SEPHS1P49903 392 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 VAC14Q08AM6 782 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 RPA4Q13156 261 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 KRT33BQ14525 404 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 SEMA3AQ14563 771 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 KCNJ11Q14654 390 aa14.25□□□□□ -0.13
ERCC1-203ENST00000340192 CACHD1Q5VU97 1274 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms