RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CELF5Q8N6W0 485 aaKnown RBP15.18■□□□□ 0.02
MBD1-203ENST00000339998 FAM110BQ8TC76 370 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 FAM83DQ9H4H8 585 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 NDE1Q9NXR1 346 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 NUDT4Q9NZJ9 180 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 IL36AQ9UHA7 158 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 RNF11Q9Y3C5 154 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 LRRC42Q9Y546 428 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 NUMA1Q14980 2115 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 SNUPNO95149 360 aaKnown RBP15.18■□□□□ 0.02
MBD1-203ENST00000339998 PFKLP17858 780 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 HOXA9P31269 272 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 HMGCS1Q01581 520 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 UBE3AQ05086 875 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 HERC3Q15034 1050 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 SFRP1Q8N474 314 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 OSCP1Q8WVF1 389 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 PDLIM5Q96HC4 596 aaKnown RBP15.18■□□□□ 0.02
MBD1-203ENST00000339998 VCANP13611 3396 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 K7ESM1 405 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 RAD51BO15315 384 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 LINC01565O15544 149 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 UROSP10746 265 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 PEX2P28328 305 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 CTSCP53634 463 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 TRAF3Q13114 568 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 GRM2Q14416 872 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 TXNDC11Q6PKC3 985 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 KIAA0907Q7Z7F0 614 aaPredicted RBP15.18■□□□□ 0.02
MBD1-203ENST00000339998 FNDC5Q8NAU1 212 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 RHBDF1Q96CC6 855 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 C1QTNF3Q9BXJ4 246 aa15.18■□□□□ 0.02
MBD1-203ENST00000339998 PTBP2Q9UKA9 531 aaKnown RBP15.18■□□□□ 0.02
MBD1-203ENST00000339998 ZNF106Q9H2Y7 1883 aaKnown RBP15.17■□□□□ 0.02
MBD1-203ENST00000339998 XPAP23025 273 aaPredicted RBP15.17■□□□□ 0.02
MBD1-203ENST00000339998 ADSLP30566 484 aaPredicted RBP15.17■□□□□ 0.02
MBD1-203ENST00000339998 WASP42768 502 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 CCNG1P51959 295 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 SLC7A2P52569 658 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 CRY1Q16526 586 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 GAB4Q2WGN9 574 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 TANGO2Q6ICL3 276 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 RNF175Q8N4F7 328 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 N4BP2L2Q92802 583 aaPredicted RBP15.17■□□□□ 0.02
MBD1-203ENST00000339998 ZDHHC7Q9NXF8 308 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 PDE10AQ9Y233 779 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 CROCCQ5TZA2 2017 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 HEPACAM2A8MVW5 462 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 UPK3BL1B0FP48 263 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 UPK3BL2E5RIL1 263 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 ZNF197O14709 1029 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 MAP3K7O43318 606 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 SGTAO43765 313 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 FGF19O95750 216 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 MLYCDO95822 493 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 IL12AP29459 219 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
MBD1-203ENST00000339998 PREPP48147 710 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 RPIAP49247 311 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 C6orf136Q5SQH8 315 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 IZUMO2Q6UXV1 221 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 MILR1Q7Z6M3 343 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 KBTBD6Q86V97 674 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 MIER2Q8N344 545 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 UCMAQ8WVF2 138 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 ATG10Q9H0Y0 220 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 PIF1Q9H611 641 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 ARL15Q9NXU5 204 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 OARD1Q9Y530 152 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 GPR45Q9Y5Y3 372 aa15.17■□□□□ 0.02
MBD1-203ENST00000339998 ATG2AQ2TAZ0 1938 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 LOC730098B7Z3J9 87 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 SLC22A2O15244 555 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 SYNCRIPO60506 623 aaKnown RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 S100BP04271 92 aaPredicted RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 VCLP18206 1134 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 ME2P23368 584 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 POLR2LP62875 67 aaKnown RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 STX5Q13190 355 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 ACOX1Q15067 660 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 ZRSR2Q15696 482 aaKnown RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 RFTN2Q52LD8 501 aaPredicted RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 BPIFB1Q8TDL5 484 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 ASB16Q96NS5 453 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 MARK1Q9P0L2 795 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 FBXO10Q9UK96 956 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 ANGPTL3Q9Y5C1 460 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 RSL1D1O76021 490 aaKnown RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 ATP1B2P14415 290 aaPredicted RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 VIPR1P32241 457 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 CPSF6Q16630 551 aaKnown RBP eCLIP15.16■□□□□ 0.02
MBD1-203ENST00000339998 CCSMST1Q4G0I0 132 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 FNDC3BQ53EP0 1204 aaKnown RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 XKR7Q5GH72 579 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 PAGE3Q5JUK9 113 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 BRAT1Q6PJG6 821 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 UBE2R2Q712K3 238 aaPredicted RBP15.16■□□□□ 0.02
MBD1-203ENST00000339998 SPATA24Q86W54 205 aa15.16■□□□□ 0.02
MBD1-203ENST00000339998 PDPRQ8NCN5 879 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms