RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GTF2H2Q13888 395 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 GRB7Q14451 532 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 PCBP2Q15366 365 aaKnown RBP eCLIP22.02■■□□□ 1.129e-7■■■■□ 24.1
PDLIM2-203ENST00000339162 ITPRIPL2Q3MIP1 535 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 GTF2H2CQ6P1K8 395 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 GK5Q6ZS86 529 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 DEFB107AQ8IZN7 70 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 KIRREL3Q8IZU9 778 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 RASGEF1AQ8N9B8 481 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 DTD2Q96FN9 168 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 TMEM79Q9BSE2 394 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 WWOXQ9NZC7 414 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 L3MBTL1Q9Y468 752 aa22.02■■□□□ 1.12
PDLIM2-203ENST00000339162 GIPC1O14908 333 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 SORBS2O94875 1100 aaKnown RBP22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 C6P13671 934 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 NUDT2P50583 147 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 CRY1Q16526 586 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 LETMD1Q6P1Q0 360 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 CHPFQ8IZ52 775 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 RP9Q8TA86 221 aaKnown RBP22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 ATP6V1E2Q96A05 226 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 RHBDF1Q96CC6 855 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 TUBGCP3Q96CW5 907 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 PPP1R16AQ96I34 528 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 MMADHCQ9H3L0 296 aaPredicted RBP22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 RAD18Q9NS91 495 aa22.02■■□□□ 1.11
PDLIM2-203ENST00000339162 ATG2BQ96BY7 2078 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 A0A088AWK7 358 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 OR7A17O14581 309 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 CBSLP0DN79 551 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 CBSP35520 551 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 SEC13P55735 322 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 NME5P56597 212 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 COL13A1Q5TAT6 717 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 ERN2Q76MJ5 926 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 ARHGAP24Q8N264 748 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 OR9I1Q8NGQ6 314 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 RCN3Q96D15 328 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 RTKNQ9BST9 563 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 ZNF576Q9H609 170 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 IPPKQ9H8X2 491 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 CCDC167Q9P0B6 97 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 NFKBIL1Q9UBC1 381 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 SLC7A8Q9UHI5 535 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 POLG2Q9UHN1 485 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 TNPO3Q9Y5L0 923 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 BRWD1Q9NSI6 2320 aa22.01■■□□□ 1.11
PDLIM2-203ENST00000339162 ARNTLO00327 626 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 EZRP15311 586 aaKnown RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 P2RY2P41231 377 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 RPIAP49247 311 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 ELP6Q0PNE2 266 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 CNTN1Q12860 1018 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 ICE2Q659A1 982 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 UBE2R2Q712K3 238 aaPredicted RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 RAVER1Q8IY67 606 aaKnown RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 LILRA3Q8N6C8 439 aaPredicted RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 HBEGFQ99075 208 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 PDE10AQ9Y233 779 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 STON1Q9Y6Q2 735 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 H0Y3Z8 333 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 TSPAN6O43657 245 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 LZTS3O60299 673 aaPredicted RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 SOD1P00441 154 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 APODP05090 189 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 UROSP10746 265 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 LTBRP36941 435 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 GALK1P51570 392 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 TMEM115Q12893 351 aaPredicted RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 SUGP1Q8IWZ8 645 aaKnown RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 ZNF382Q96SR6 550 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 ARL15Q9NXU5 204 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 NKX1-2Q9UD57 310 aaPredicted RBP22■■□□□ 1.11
PDLIM2-203ENST00000339162 PACSIN3Q9UKS6 424 aa22■■□□□ 1.11
PDLIM2-203ENST00000339162 H0Y858 1186 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 PSMD11O00231 422 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 PEX11AO75192 247 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 PDE5AO76074 875 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 ENO3P13929 434 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 FASTKQ14296 549 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 GBX1Q14549 363 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 AGKQ53H12 422 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 WASHC2DQ5SRD0 308 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 PHYKPLQ8IUZ5 450 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 NRSN1Q8IZ57 195 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 OR4F6Q8NGB9 312 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 DTX3LQ8TDB6 740 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 NUS1Q96E22 293 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 RIPOR3Q96MK2 946 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 VPS35Q96QK1 796 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 NPAS2Q99743 824 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 CD244Q9BZW8 370 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 KLHL42Q9P2K6 505 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 CNOT6Q9ULM6 557 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 LRRK1Q38SD2 2015 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 PSMD12O00232 456 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 SLC22A2O15244 555 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 CAPN1P07384 714 aa21.99■■□□□ 1.11
PDLIM2-203ENST00000339162 HGFP14210 728 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms