RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 NMUR2Q9GZQ4 415 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CCDC86Q9H6F5 360 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 GRHL1Q9NZI5 618 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ZNF282Q9UDV7 671 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 DGKBQ9Y6T7 804 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 TRIM64CA6NLI5 447 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 EPHB6O15197 1021 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 SLC35G6P0C7Q6 338 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 KHKP50053 298 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CARTPTQ16568 116 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 GPR142Q7Z601 462 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 RBM15BQ8NDT2 890 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 RIOK2Q9BVS4 552 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 KAT8Q9H7Z6 458 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 CEP170BQ9Y4F5 1589 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 AIREO43918 545 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 SRPRAP08240 638 aaKnown RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 ITPKAP23677 461 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 DRICH1Q6PGQ1 229 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 SPATA6LQ8N4H0 392 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 OR2L3Q8NG85 312 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 C9orf43Q8TAL5 461 aaPredicted RBP12.93□□□□□ -0.34
HLCS-201ENST00000336648 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 ACAT2Q9BWD1 397 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 SDCBP2Q9H190 292 aa12.93□□□□□ -0.34
HLCS-201ENST00000336648 MEGF6O75095 1541 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 MATN3O15232 486 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TACR2P21452 398 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 CD52P31358 61 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 MAPK12P53778 367 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 GTF2H2Q13888 395 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PTPN20Q4JDL3 420 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 GTF2H2CQ6P1K8 395 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PPM1MQ96MI6 270 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 FAM83DQ9H4H8 585 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PLEKHA1Q9HB21 404 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RUVBL1Q9Y265 456 aaKnown RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3DA0A087WVF3 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3IA0A087WXS9 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3EA0A087X179 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3KA0A087X1G2 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3FA6NER0 549 aaPredicted RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3LB9A6J9 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 SYN3O14994 580 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3HP0C7X1 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 FSHRP23945 695 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PTGER3P43115 390 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RPIAP49247 311 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 SEMA5AQ13591 1074 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3GQ6DHY5 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3CQ6IPX1 549 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ANKRD23Q86SG2 305 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 GPR65Q8IYL9 337 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 TBC1D3Q8IZP1 549 aaPredicted RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 PLD5Q8N7P1 536 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 JOSD2Q8TAC2 188 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ALG3Q92685 438 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 EXOC2Q96KP1 924 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PDE10AQ9Y233 779 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 SLC27A5Q9Y2P5 690 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 HES2Q9Y543 173 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RIC1Q4ADV7 1423 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 A0A1W2PQH9 124 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 E9PAM4 449 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RPLP0P05388 317 aaKnown RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 CCR10P46092 362 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RHBDL3P58872 404 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 RASGEF1BQ0VAM2 473 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 UFD1Q92890 307 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PLD4Q96BZ4 506 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 DMRTB1Q96MA1 342 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 WDR55Q9H6Y2 383 aaPredicted RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 RC3H2Q9HBD1 1191 aaKnown RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 TREM1Q9NP99 234 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ABI3Q9P2A4 366 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 PCDHGA11Q9Y5H2 935 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 POP4O95707 220 aaKnown RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 FRRS1Q6ZNA5 592 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ZNF433Q8N7K0 673 aaPredicted RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 BRSK1Q8TDC3 778 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ART5Q96L15 291 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 CIB1Q99828 191 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 YTHDF1Q9BYJ9 559 aaKnown RBP12.92□□□□□ -0.34
HLCS-201ENST00000336648 PCDHGB1Q9Y5G3 927 aa12.92□□□□□ -0.34
HLCS-201ENST00000336648 ARPC4-TTLL3A0A0A6YYG9 625 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms