RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLC36A3Q495N2 470 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 LINGO4Q6UY18 593 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 CHPT1Q8WUD6 406 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 DGCR6LQ9BY27 220 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 IFT80Q9P2H3 777 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 ABCD2Q9UBJ2 740 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PLXNB2O15031 1838 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 DUSP11O75319 330 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 RASAL1O95294 804 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 OGNP20774 298 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 TACR2P21452 398 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 C18orf21Q32NC0 220 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 C6orf136Q5SQH8 315 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PSAPL1Q6NUJ1 521 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 AFTPHQ6ULP2 937 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 CD300LGQ6UXG3 332 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 SCML4Q8N228 414 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 MFSD2AQ8NA29 543 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 NRBF2Q96F24 287 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZNF599Q96NL3 588 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PCDHB8Q9UN66 801 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 POLR3HQ9Y535 204 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PCDHA9Q9Y5H5 950 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZNF623O75123 536 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 RSL1D1O76021 490 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 MATN4O95460 622 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 DUSP4Q13115 394 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 ATP6AP1Q15904 470 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 TAF12Q16514 161 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 FAM98BQ52LJ0 330 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PTRHD1Q6GMV3 140 aaKnown RBP16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PIANPQ8IYJ0 282 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 ITPKCQ96DU7 683 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 DERL2Q9GZP9 239 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 HIPK3Q9H422 1215 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 FANCEQ9HB96 536 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 AIG1Q9NVV5 245 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 SLC30A1Q9Y6M5 507 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 U3KQV3 271 aa16.29■□□□□ 0.2
CDC42EP4-201ENST00000335793 PDCD11Q14690 1871 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 TYW5A2RUC4 315 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 WASH4PA8MWX3 477 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ASGR1P07306 291 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 G6PDP11413 515 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 TYMPP19971 482 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 RGRP47804 291 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 YBEYP58557 167 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ERVK-8P63133 956 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 AAK1Q2M2I8 961 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 AP5B1Q2VPB7 878 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 CCDC81Q6ZN84 652 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 MRPL10Q7Z7H8 261 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 IGFN1Q86VF2 1251 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZDHHC13Q8IUH4 622 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 DENND1CQ8IV53 801 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 TMEM199Q8N511 208 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 OR7G1Q8NGA0 311 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 DUS3LQ96G46 650 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZBTB18Q99592 522 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 NPLQ9BXD5 320 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 TRIM39Q9HCM9 518 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 KLQ9UEF7 1012 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 KLHL3Q9UH77 587 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 NOBOXO60393 691 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 PRAMEF11O60813 436 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 LPOP22079 712 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 SMU1Q2TAY7 513 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 TBPL2Q6SJ96 375 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 PHYKPLQ8IUZ5 450 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 NATD1Q8N6N6 113 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 MTFMTQ96DP5 389 aaKnown RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 GPR63Q9BZJ6 419 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZNF229Q9UJW7 825 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ASB1Q9Y576 335 aa16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 ZFP37Q9Y6Q3 630 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP4-201ENST00000335793 GLTPD2A6NH11 291 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 A8MX80 341 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 H0Y626 953 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 DLGAP1O14490 977 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 B4GALT3O60512 393 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 TRIM16O95361 564 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 IFNA8P32881 189 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 MTHFRP42898 656 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 HTR6P50406 440 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 RPL38P63173 70 aaKnown RBP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 TIAL1Q01085 375 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 LAPTM5Q13571 262 aa16.27■□□□□ 0.2
CDC42EP4-201ENST00000335793 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms