RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 ATXN7L2Q5T6C5 722 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 RALGPS2Q86X27 583 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 SIDT2Q8NBJ9 832 aaKnown RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 TNIP2Q8NFZ5 429 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ZNF486Q96H40 463 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 MAGED4Q96JG8 741 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ZNF347Q96SE7 839 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ERVK-6Q9BXR3 956 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 TM6SF2Q9BZW4 377 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 MED16Q9Y2X0 877 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ASB1Q9Y576 335 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ARVCFO00192 962 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 PRLP01236 227 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ITGB6P18564 788 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 MYF6P23409 242 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 YBEYP58557 167 aaPredicted RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 TAF12Q16514 161 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ZRANB3Q5FWF4 1079 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 WDR45BQ5MNZ6 344 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.224e-6■■□□□ 12.1
SF1-202ENST00000334944 SPPL2CQ8IUH8 684 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ELMOD1Q8N336 334 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 OR7G1Q8NGA0 311 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 TCF12Q99081 682 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 TDRD1Q9BXT4 1180 aaKnown RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.7□□□□□ -0.227e-7■■■■□ 23
SF1-202ENST00000334944 AGO1Q9UL18 857 aaKnown RBP13.7□□□□□ -0.22
SF1-202ENST00000334944 PSME2Q9UL46 239 aa13.7□□□□□ -0.22
SF1-202ENST00000334944 ZNF840PA6NDX5 716 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 H3BNC9 293 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 K7ERQ8 282 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 BTN3A1O00481 513 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 MRASO14807 208 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 CLASP2O75122 1294 aaKnown RBP13.69□□□□□ -0.22
SF1-202ENST00000334944 NDUFS3O75489 264 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
SF1-202ENST00000334944 TGM1P22735 817 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 CXCR2P25025 360 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 SLC7A1P30825 629 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 GKP32189 559 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 MAPKAPK2P49137 400 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 SLC11A2P49281 568 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 SETMARQ53H47 684 aaPredicted RBP13.69□□□□□ -0.22
SF1-202ENST00000334944 TMEM236Q5W0B7 351 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 UGT3A1Q6NUS8 523 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 PAF1Q8N7H5 531 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 ADAMTS16Q8TE57 1224 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 NUDT8Q8WV74 236 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 CDK15Q96Q40 435 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 TRIB3Q96RU7 358 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 ACOX2Q99424 681 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 VN1R3Q9BXE9 311 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 HOXD1Q9GZZ0 328 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 HACD3Q9P035 362 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 SEPT3Q9UH03 358 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 RNF112Q9ULX5 631 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 FCF1Q9Y324 198 aaKnown RBP13.69□□□□□ -0.22
SF1-202ENST00000334944 PCDHGA11Q9Y5H2 935 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 STC2O76061 302 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 PHC1P78364 1004 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 SLC14A2Q15849 920 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 C18orf21Q32NC0 220 aaPredicted RBP13.69□□□□□ -0.22
SF1-202ENST00000334944 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.227e-15■□□□□ 8.7
SF1-202ENST00000334944 AKAP14Q86UN6 197 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 SLC22A9Q8IVM8 553 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 FUNDC1Q8IVP5 155 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 CARNMT1Q8N4J0 409 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 TWIST2Q8WVJ9 160 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 CCDC126Q96EE4 140 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 PSD2Q9BQI7 771 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 C17orf80Q9BSJ5 609 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 ABCB10Q9NRK6 738 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 FNIP2Q9P278 1114 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 RAI2Q9Y5P3 530 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
SF1-202ENST00000334944 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 MOXD2PA6NHM9 499 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ZSCAN5BA6NJL1 495 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 INSIG1O15503 277 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 CASP2P42575 452 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 APLP1P51693 650 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 SLC7A2P52569 658 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 DIO3P55073 304 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 RING1Q06587 406 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ZNF177Q13360 481 aaPredicted RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 ZNF846Q147U1 533 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 NDUFA5Q16718 116 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 UGT3A2Q3SY77 523 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 OTUD3Q5T2D3 398 aaPredicted RBP13.68□□□□□ -0.22
SF1-202ENST00000334944 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ABRAXAS1Q6UWZ7 409 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 SLCO6A1Q86UG4 719 aa13.68□□□□□ -0.22
SF1-202ENST00000334944 ZCCHC7Q8N3Z6 543 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms