RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PCID2Q5JVF3 399 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 ZNF449Q6P9G9 518 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 XKR5Q6UX68 686 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 GPR155Q7Z3F1 870 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 CLDN19Q8N6F1 224 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 SPDYE1Q8NFV5 336 aaPredicted RBP27■■□□□ 1.91
ATPAF1-201ENST00000329231 RSC1A1Q92681 617 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 MAGOHBQ96A72 148 aaKnown RBP27■■□□□ 1.91
ATPAF1-201ENST00000329231 ZDHHC12Q96GR4 267 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 COG4Q9H9E3 785 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 WDR70Q9NW82 654 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 EPHA6Q9UF33 1036 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 PCDHB11Q9Y5F2 797 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 HEBP2Q9Y5Z4 205 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 PGRMC1O00264 195 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 GOT2P00505 430 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 PRAMEP78395 509 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 DCAF12Q5T6F0 453 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 CAPRIN2Q6IMN6 1127 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 PACS1Q6VY07 963 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 CERS6Q6ZMG9 384 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 ZFAND4Q86XD8 727 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 LILRA3Q8N6C8 439 aaPredicted RBP26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 BMPERQ8N8U9 685 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 OR6P1Q8NGX9 317 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 RMDN2Q96LZ7 410 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 ZNF778Q96MU6 729 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 AP1M1Q9BXS5 423 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 IL22Q9GZX6 179 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 RAB33BQ9H082 229 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 CPNE5Q9HCH3 593 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 BFARQ9NZS9 450 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 COLEC10Q9Y6Z7 277 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 ZFYVE26Q68DK2 2539 aa26.99■■□□□ 1.91
ATPAF1-201ENST00000329231 TPSB2P20231 275 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 NPY2RP49146 381 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 MC2RQ01718 297 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 RPA4Q13156 261 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 KRT33BQ14525 404 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 TRIP13Q15645 432 aaPredicted RBP26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 TPSAB1Q15661 275 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 OR4L1Q8NH43 312 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 SGSM3Q96HU1 749 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 TEFMQ96QE5 360 aaKnown RBP26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 CCNL2Q96S94 520 aaPredicted RBP26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 OSBPL9Q96SU4 736 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 FBXO8Q9NRD0 319 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 CHRAC1Q9NRG0 131 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 B3GALT1Q9Y5Z6 326 aa26.98■■□□□ 1.91
ATPAF1-201ENST00000329231 AHCTF1Q8WYP5 2266 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 STMND1H3BQB6 276 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 RASSF9O75901 435 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 NDUFS1P28331 727 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 PPARGP37231 505 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 LEPRP48357 1165 aaKnown RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 VAC14Q08AM6 782 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 TGIF1Q15583 401 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 ZNF658BQ4V348 819 aaPredicted RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 FASTKD1Q53R41 847 aaKnown RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 IRGCQ6NXR0 463 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 DUS1LQ6P1R4 473 aaKnown RBP26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 PMEPA1Q969W9 287 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 KIR3DX1Q9H7L2 352 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 ITPR1Q14643 2758 aa26.97■■□□□ 1.91
ATPAF1-201ENST00000329231 TEX51A0A1B0GUA7 166 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 F8W8V4 182 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 IFRD1O00458 451 aaPredicted RBP26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 KRT14P02533 472 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 FTH1P02794 183 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 COILP38432 576 aaPredicted RBP26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 CD151P48509 253 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 SARNPP82979 210 aaKnown RBP26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 GPS1Q13098 491 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 CYP1B1Q16678 543 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 ARHGAP40Q5TG30 622 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 ANKS6Q68DC2 871 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 TTC27Q6P3X3 843 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 LRRC8BQ6P9F7 803 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 CEACAM20Q6UY09 585 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 CCDC81Q6ZN84 652 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 PRSS42Q7Z5A4 293 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 DTX1Q86Y01 620 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 ACTRT1Q8TDG2 376 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 COG1Q8WTW3 980 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 JPH3Q8WXH2 748 aaPredicted RBP26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 ZPBPQ9BS86 351 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 OR52A5Q9H2C5 316 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 ZNF768Q9H5H4 540 aaKnown RBP26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 SLC24A2Q9UI40 661 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 ANAPC5Q9UJX4 755 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 PRSS21Q9Y6M0 314 aa26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.96■■□□□ 1.91
ATPAF1-201ENST00000329231 CES2O00748 559 aa26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 OR56A5P0C7T3 313 aa26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 VPS41P49754 854 aa26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 AARS2Q5JTZ9 985 aaKnown RBP26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 CACHD1Q5VU97 1274 aa26.95■■□□□ 1.9
ATPAF1-201ENST00000329231 ZNF534Q76KX8 674 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms