RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 VCANP13611 3396 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 BIRC5O15392 142 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 KERAO60938 352 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 FUCA1P04066 466 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 IRX4P78413 519 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 GUCY1A3Q02108 690 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 PTK2BQ14289 1009 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 PCLAFQ15004 111 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 OR4D1Q15615 310 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 TSNQ15631 228 aaKnown RBP10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 PYCR3Q53H96 274 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 ZYG11AQ6WRX3 759 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 LPCAT2Q7L5N7 544 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 ADAMTSL2Q86TH1 951 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 IQCHQ86VS3 1027 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 AMZ2Q86W34 360 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 VRK3Q8IV63 474 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 SLC22A15Q8IZD6 547 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 SLC22A18ASQ8N1D0 253 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 DYDC1Q8WWB3 177 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 GAB3Q8WWW8 586 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 DNASE2BQ8WZ79 361 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 OR1E3Q8WZA6 343 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 PDXPQ96GD0 296 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 COPG2Q9UBF2 871 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 KLQ9UEF7 1012 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 ZNHIT2Q9UHR6 403 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 PRKAB1Q9Y478 270 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 SLCO1B1Q9Y6L6 691 aa10.05□□□□□ -0.8
VIPAS39-201ENST00000327028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 A0A1W2PR77 199 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 G3V2L1 256 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CDC7O00311 574 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 BPGMP07738 259 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 THEGLP0DJG4 465 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CPA3P15088 417 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 RACK1P63244 317 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 DMPKQ09013 629 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 RPA4Q13156 261 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 WDR45BQ5MNZ6 344 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 ENPP7Q6UWV6 458 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 TMEFF1Q8IYR6 380 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 MFSD2AQ8NA29 543 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 STAG3L4Q8TBR4 150 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 NELL1Q92832 810 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 OR2M4Q96R27 311 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 ATOH8Q96SQ7 321 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CPSF2Q9P2I0 782 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 FAM8A1Q9UBU6 413 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 SLC23A2Q9UGH3 650 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 MOSPD1Q9UJG1 213 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 TSR3Q9UJK0 312 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 RNF112Q9ULX5 631 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 TNRC6BQ9UPQ9 1833 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 THADAQ6YHU6 1953 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 KCNJ13O60928 360 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 MYL2P10916 166 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 VCLP18206 1134 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 AVPR2P30518 371 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 GNPDA1P46926 289 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 PREPP48147 710 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 OVGP1Q12889 678 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 SP140Q13342 867 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 NFE2L1Q14494 772 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 FAM83HQ6ZRV2 1179 aaPredicted RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 TAX1BP1Q86VP1 789 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 ABCA7Q8IZY2 2146 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 LILRA3Q8N6C8 439 aaPredicted RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 C1orf216Q8TAB5 229 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 KLHDC7BQ96G42 594 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CAPS2Q9BXY5 557 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CCDC134Q9H6E4 229 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CARS2Q9HA77 564 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 CYP4F12Q9HCS2 524 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 TM9SF3Q9HD45 589 aa10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 MRPL40Q9NQ50 206 aaKnown RBP10.04□□□□□ -0.8
VIPAS39-201ENST00000327028 SPTY2D1-AS1A0A0U1RR47 76 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PRR19A6NJB7 356 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SYCE1LA8MT33 242 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SLC16A5O15375 505 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 C8GP07360 202 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ACP5P13686 325 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 TAC1P20366 129 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 CD38P28907 300 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 MAPK9P45984 424 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 SRP54P61011 504 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PDK4Q16654 411 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 ALG11Q2TAA5 492 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 PMS2CLQ68D20 193 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 RASGRP3Q8IV61 690 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 CFAP206Q8IYR0 622 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 MAGEB18Q96M61 343 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 MECRQ9BV79 373 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
VIPAS39-201ENST00000327028 DPEP2Q9H4A9 486 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms