RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 LPIN3Q9BQK8 851 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PRDM12Q9H4Q4 367 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CERS4Q9HA82 394 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TVP23BQ9NYZ1 205 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF490Q9ULM2 529 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 TM7SF2O76062 418 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ABHD2P08910 425 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SLC2A2P11168 524 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 GRK1Q15835 563 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MEA1Q16626 185 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 IL23RQ5VWK5 629 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MARCH9Q86YJ5 346 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MCEMP1Q8IX19 187 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 GALNT11Q8NCW6 608 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 OR2L2Q8NH16 312 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CADM1Q9BY67 442 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 PLLPQ9Y342 182 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ST14Q9Y5Y6 855 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 H6PDO95479 791 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 UBA1P22314 1058 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 RPL35P42766 123 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 TRIM28Q13263 835 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 MINDY4Q4G0A6 757 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF280BQ86YH2 543 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZFPM1Q8IX07 1006 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ANKFN1Q8N957 763 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PCDH19Q8TAB3 1148 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 AP2M1Q96CW1 435 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SLC22A4Q9H015 551 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TRPV4Q9HBA0 871 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 IL17RBQ9NRM6 502 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 NR2E1Q9Y466 385 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MADDQ8WXG6 1647 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 EDF1O60869 148 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 MLYCDO95822 493 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF132P52740 706 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 NRLP54845 237 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SEMG2Q02383 582 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PTGES3Q15185 160 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 ARL9Q6T311 187 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 XKR5Q6UX68 686 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 LINGO4Q6UY18 593 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 OR5J2Q8NH18 312 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 KCTD5Q9NXV2 234 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TSPAN1O60635 241 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 CYP3A4P08684 503 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 LINGO3P0C6S8 592 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MYCLP1P12525 358 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 NDUFV1P49821 464 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 FAM35AQ86V20 835 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 LZTR1Q8N653 840 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ZNF398Q8TD17 642 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 E9PCH4 1651 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 YDJCA8MPS7 323 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ACKR2O00590 384 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PDPK1O15530 556 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ITGA2P17301 1181 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PSMA1P25786 263 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 RPS9P46781 194 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 HECTD2Q5U5R9 776 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 TMED4Q7Z7H5 227 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 FITM2Q8N6M3 262 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 UBR7Q8N806 425 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 XAGE5Q8WWM1 108 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MGME1Q9BQP7 344 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MRPL9Q9BYD2 267 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 CTPS2Q9NRF8 586 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 DPP7Q9UHL4 492 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MAGEL2Q9UJ55 1249 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 YES1P07947 543 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PTNP21246 168 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 CYP2C18P33260 490 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 RYKP34925 604 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 RPL7AP62424 266 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 TMEM236Q5W0B7 351 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ZDHHC17Q8IUH5 632 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 CRYBG2Q8N1P7 616 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 STOML3Q8TAV4 291 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ZNF395Q9H8N7 513 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 MYO7BQ6PIF6 2116 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 F7P08709 466 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 CXCR3P49682 368 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 FAM83AQ86UY5 434 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PHYKPLQ8IUZ5 450 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 OR10A6Q8NH74 314 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 SLC7A6OSQ96CW6 309 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 PLEKHA1Q9HB21 404 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 AMBNQ9NP70 447 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 SEC14L3Q9UDX4 400 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PADI2Q9Y2J8 665 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 A0A1W2PQ67 120 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 DDNO94850 711 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 OTCP00480 354 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MRPS6P82932 125 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 CCDC58Q4VC31 144 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 RNASEH2BQ5TBB1 312 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 PYHIN1Q6K0P9 492 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 OR4L1Q8NH43 312 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PDCD2LQ9BRP1 358 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms