RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 IGLON5A6NGN9 336 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 SNUPNO95149 360 aaKnown RBP18.08■□□□□ 0.48
USP39-201ENST00000323701 ESRRAP11474 423 aaPredicted RBP18.08■□□□□ 0.48
USP39-201ENST00000323701 TTLL9Q3SXZ7 439 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 RAET1GQ6H3X3 334 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 NUDT18Q6ZVK8 323 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 PDPRQ8NCN5 879 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 ELMO1Q92556 727 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 CATSPER2Q96P56 530 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 TMEM79Q9BSE2 394 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 TBC1D10AQ9BXI6 508 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 TAS2R1Q9NYW7 299 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 GIMAP2Q9UG22 337 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 PTBP2Q9UKA9 531 aaKnown RBP18.08■□□□□ 0.48
USP39-201ENST00000323701 TIMM22Q9Y584 194 aa18.08■□□□□ 0.48
USP39-201ENST00000323701 A0A1W2PQF6 199 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 SHISA7A6NL88 538 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 CFAP99D6REC4 459 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 NARSO43776 548 aaKnown RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 ATP5HO75947 161 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 CALB2P22676 271 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 HSPA7P48741 367 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 RPS14P62263 151 aaKnown RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 LDLRAP1Q5SW96 308 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 SWT1Q5T5J6 900 aaKnown RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 FAM46CQ5VWP2 391 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 RAVER1Q8IY67 606 aaKnown RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 HDDC3Q8N4P3 179 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 LRCH3Q96II8 777 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 HGH1Q9BTY7 390 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 OR2AG1Q9H205 316 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 PDE10AQ9Y233 779 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 A8MUI8 341 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 NUAK1O60285 661 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 SYNCRIPO60506 623 aaKnown RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 GPC4O75487 556 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 FGF4P08620 206 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 PTPN4P29074 926 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 GPR1P46091 355 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 PREPP48147 710 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 KANK2Q63ZY3 851 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 TMEM220Q6QAJ8 160 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 NLRP8Q86W28 1048 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 CLYBLQ8N0X4 340 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 CXorf40AQ8TE69 158 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 SKA2Q8WVK7 121 aaPredicted RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 RHBDF1Q96CC6 855 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 LENG8Q96PV6 779 aaPredicted RBP18.07■□□□□ 0.48
USP39-201ENST00000323701 KLHL42Q9P2K6 505 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 BTRCQ9Y297 605 aa18.07■□□□□ 0.48
USP39-201ENST00000323701 LOC100653049A0A140TA62 436 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 TRPC5OSA6NMA1 111 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 MEI4A8MW99 385 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 AZIN1O14977 448 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 RAD51BO15315 384 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 LILRB5O75023 590 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 KRT34O76011 436 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 CBSLP0DN79 551 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 NTSR1P30989 418 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 CBSP35520 551 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 DPTQ07507 201 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 TCHHL1Q5QJ38 904 aaPredicted RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 METTL21CQ5VZV1 264 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 XKR5Q6UX68 686 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ACAD11Q709F0 780 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ADGRG6Q86SQ4 1221 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 PHYKPLQ8IUZ5 450 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ASB11Q8WXH4 323 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 GABRG3Q99928 467 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 CADM1Q9BY67 442 aaKnown RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 CD248Q9HCU0 757 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 TAGLN3Q9UI15 199 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 STK38LQ9Y2H1 464 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 OR7A17O14581 309 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 PIP5K1BO14986 540 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 RNASEH2AO75792 299 aaKnown RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 AP2A2O94973 939 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 KLF8O95600 359 aaPredicted RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 VCLP18206 1134 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 CD72P21854 359 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 PBLDP30039 288 aaPredicted RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 PRLHRP49683 370 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 INHBCP55103 352 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ERVPABLB-1P60509 514 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ELF3P78545 371 aaPredicted RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 KLF10Q13118 480 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 FGL2Q14314 439 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 PCBP2Q15366 365 aaKnown RBP eCLIP18.06■□□□□ 0.48
USP39-201ENST00000323701 CYB5D1Q6P9G0 228 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ZNF765Q7L2R6 523 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 GOLGA7Q7Z5G4 137 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 TWIST2Q8WVJ9 160 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 RAB7BQ96AH8 199 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 EGFL8Q99944 293 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 CCDC28BQ9BUN5 200 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 NOL11Q9H8H0 719 aaKnown RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 ATXN10Q9UBB4 475 aa18.06■□□□□ 0.48
USP39-201ENST00000323701 ZFR2Q9UPR6 939 aaKnown RBP18.06■□□□□ 0.48
USP39-201ENST00000323701 SORCS3Q9UPU3 1222 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms