RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ANKMY2Q8IV38 441 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 SPNS2Q8IVW8 549 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 TRIM48Q8IWZ4 208 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
LRRC42-201ENST00000319223 ELMO1Q92556 727 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 LPGAT1Q92604 370 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 CXorf40BQ96DE9 158 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 ATXN7L3BQ96GX2 97 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 C12orf66Q96MD2 445 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 BIRC8Q96P09 236 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 DEPDC7Q96QD5 511 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 IMP3Q9NV31 184 aaKnown RBP16.24■□□□□ 0.19
LRRC42-201ENST00000319223 TMEM9Q9P0T7 183 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 CRYL1Q9Y2S2 319 aa16.24■□□□□ 0.19
LRRC42-201ENST00000319223 UBA6A0AVT1 1052 aaPredicted RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 PMS2P1A4D2B8 440 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 KLHL33A6NCF5 533 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 S1PR4O95977 384 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 FTH1P02794 183 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 ERVK-10P10266 1014 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 MTHFD1P11586 935 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 OGNP20774 298 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 FMO4P31512 558 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 CSE1LP55060 971 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 EIF3BP55884 814 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 PDIA2Q13087 525 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 GPR18Q14330 331 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 HSP90AA5PQ58FG0 334 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 ZNF470Q6ECI4 717 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 UNC5AQ6ZN44 842 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 TMEM26Q6ZUK4 368 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 SDCCAG8Q86SQ7 713 aaPredicted RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 BBOF1Q8ND07 529 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 WDR48Q8TAF3 677 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 CFAP36Q96G28 342 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 SEMA6CQ9H3T2 930 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 STN1Q9H668 368 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 VPS37BQ9H9H4 285 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 POT1Q9NUX5 634 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 OGFRQ9NZT2 677 aa16.23■□□□□ 0.19
LRRC42-201ENST00000319223 UTP11Q9Y3A2 253 aaKnown RBP16.23■□□□□ 0.19
LRRC42-201ENST00000319223 ESYT3A0FGR9 886 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SLC5A10A0PJK1 596 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 E7ESA3 106 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 AGRPO00253 132 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 QSOX1O00391 747 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SLC35G4P0C7Q5 338 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 MPSTP25325 297 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SLC1A2P43004 574 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 MAPK9P45984 424 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 THOC5Q13769 683 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 BOP1Q14137 746 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 PTRHD1Q6GMV3 140 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 C8orf74Q6P047 294 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 TRMT10BQ6PF06 316 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 ZDHHC24Q6UX98 284 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 VRK3Q8IV63 474 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 MMGT1Q8N4V1 131 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 ART4Q93070 314 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SH3KBP1Q96B97 665 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 TCF12Q99081 682 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 NRTNQ99748 197 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 CARD6Q9BX69 1037 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 IARS2Q9NSE4 1012 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 ZC3H7BQ9UGR2 993 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 BHMG1C9JSJ3 638 aaPredicted RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 CPNE6O95741 557 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 TYRP1P17643 537 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 RPS3P23396 243 aaKnown RBP eCLIP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 PLTPP55058 493 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 MPP1Q00013 466 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 ZFP36L1Q07352 338 aaKnown RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 TUBB2AQ13885 445 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 MAP9Q49MG5 647 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SPANXN3Q5MJ09 141 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 PIM3Q86V86 326 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 KCNMB4Q86W47 210 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SLITRK4Q8IW52 837 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 PHC3Q8NDX5 983 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 FBXO36Q8NEA4 188 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 FBXO25Q8TCJ0 367 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 FAM136AQ96C01 138 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 TUBB2BQ9BVA1 445 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.22■□□□□ 0.19
LRRC42-201ENST00000319223 RAB17Q9H0T7 212 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 UCK1Q9HA47 277 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 SLC17A6Q9P2U8 582 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 GALPQ9UBC7 116 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 CDYLQ9Y232 598 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 CEP295Q9C0D2 2601 aa16.22■□□□□ 0.19
LRRC42-201ENST00000319223 LILRA5A6NI73 299 aa16.21■□□□□ 0.19
LRRC42-201ENST00000319223 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.19
LRRC42-201ENST00000319223 NIPSNAP2O75323 286 aa16.21■□□□□ 0.19
LRRC42-201ENST00000319223 TTC4O95801 387 aa16.21■□□□□ 0.19
LRRC42-201ENST00000319223 GSTM1P09488 218 aa16.21■□□□□ 0.19
LRRC42-201ENST00000319223 GSTM4Q03013 218 aa16.21■□□□□ 0.19
LRRC42-201ENST00000319223 CBLBQ13191 982 aa16.21■□□□□ 0.19
LRRC42-201ENST00000319223 SQSTM1Q13501 440 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms