RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 RPRD1BQ9NQG5 326 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ASIC5Q9NY37 505 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TBC1D14Q9P2M4 693 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SLC2A6Q9UGQ3 507 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OSGIN1Q9UJX0 560 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PPP2R3BQ9Y5P8 575 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 COMMD10Q9Y6G5 202 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 V9GYQ6 96 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 NRCAMQ92823 1304 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MUSKO15146 869 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RPP40O75818 363 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OTCP00480 354 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PCNAP12004 261 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PTX3P26022 381 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 KCNC1P48547 511 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OR2B6P58173 313 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 NR6A1Q15406 480 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DDR2Q16832 855 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 KIAA1614Q5VZ46 1190 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OR2T5Q6IEZ7 315 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ARMCX6Q7L4S7 300 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ADAMTSL2Q86TH1 951 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RBM23Q86U06 439 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OR2T29Q8NH02 315 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MRGPRX2Q96LB1 330 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PITX2Q99697 317 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SPATC1LQ9H0A9 340 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TUBB1Q9H4B7 451 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PDGFCQ9NRA1 345 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DCAF13Q9NV06 445 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 OSER1Q9NX31 292 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 NUDT4Q9NZJ9 180 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ERVK-18Q9QC07 812 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RBMX2Q9Y388 322 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHGB6Q9Y5F9 930 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHGB2Q9Y5G2 931 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 H0Y858 1186 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DPM1O60762 260 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 GUCY1B2O75343 617 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 UGT2B17O75795 530 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CCNDBP1O95273 360 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 MT-ND1P03886 318 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ALOX12P18054 663 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CD72P21854 359 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 NUDT1P36639 197 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PBX3P40426 434 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 UGT2B15P54855 530 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RAB25P57735 213 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SCN1BQ07699 218 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CD300CQ08708 224 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 FCHO2Q0JRZ9 810 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 C19orf57Q0VDD7 668 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 GTF2H3Q13889 308 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DPY19L1Q2PZI1 675 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 STEAP3Q658P3 488 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 KDELC2Q7Z4H8 507 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PPP1R16BQ96T49 567 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DPEP3Q9H4B8 488 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 TLR9Q9NR96 1032 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 LYVE1Q9Y5Y7 322 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ARFGEF1Q9Y6D6 1849 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 HMX3A6NHT5 357 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 WASH4PA8MWX3 477 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 WNT9AO14904 365 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SIX3O95343 332 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 LGALS2P05162 132 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CES1P23141 567 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DNAJA1P31689 397 aaKnown RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 HNF4AP41235 474 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SCNN1GP51170 649 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 UFM1P61960 85 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 CAPN13Q6MZZ7 669 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 DLEU7Q6UYE1 221 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SNX20Q7Z614 316 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SLC7A5P1Q8MH63 180 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 METTL4Q8N3J2 472 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 SMARCD1Q96GM5 515 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF668Q96K58 619 aaPredicted RBP4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RIPOR3Q96MK2 946 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PHOX2BQ99453 314 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 RAD9AQ99638 391 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 INVSQ9Y283 1065 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 PCDHB14Q9Y5E9 798 aa4.71□□□□□ -1.66
PTPN13-201ENST00000316707 LOXHD1Q8IVV2 1947 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 OR2A25A4D2G3 310 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 STX7O15400 261 aaKnown RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 NDUFS3O75489 264 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 NR4A1P22736 598 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ARL1P40616 181 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 IL2P60568 153 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 LSM3P62310 102 aaKnown RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 SIM2Q14190 667 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 SEMA3AQ14563 771 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 MAD2L1BPQ15013 274 aaPredicted RBP4.7□□□□□ -1.66
PTPN13-201ENST00000316707 RAB41Q5JT25 222 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 ZNF280DQ6N043 979 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 GPR149Q86SP6 731 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 LRCH3Q96II8 777 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 SIGLEC11Q96RL6 698 aa4.7□□□□□ -1.66
PTPN13-201ENST00000316707 NXF3Q9H4D5 531 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms