RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 OGFOD2Q6N063 350 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 SERPINA13PQ6UXR4 307 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 MBOAT1Q6ZNC8 495 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 DPPA4Q7L190 304 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 METTL6Q8TCB7 284 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 ATP6V1E2Q96A05 226 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 ZNF570Q96NI8 536 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 RIOK2Q9BVS4 552 aaKnown RBP18.04■□□□□ 0.48
CCDC43-201ENST00000315286 CD244Q9BZW8 370 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 RDH14Q9HBH5 336 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 SDR39U1Q9NRG7 319 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-201ENST00000315286 NMRK1Q9NWW6 199 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 WWOXQ9NZC7 414 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 SUN2Q9UH99 717 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 SARDHQ9UL12 918 aa18.04■□□□□ 0.48
CCDC43-201ENST00000315286 KATNA1O75449 491 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 NFATC1O95644 943 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 CREB5Q02930 508 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 TAF11Q15544 211 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 RARS2Q5T160 578 aaKnown RBP18.03■□□□□ 0.48
CCDC43-201ENST00000315286 TLDC1Q6P9B6 456 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 PARS2Q7L3T8 475 aaKnown RBP18.03■□□□□ 0.48
CCDC43-201ENST00000315286 DCUN1D1Q96GG9 259 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 DEC1Q9P2X7 70 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 GPR45Q9Y5Y3 372 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 FADS2P1A8MWK0 482 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 C9JVG2 144 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 E7ENX8 843 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 KPNA3O00505 521 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-201ENST00000315286 MRASO14807 208 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 HLA-EP13747 358 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 IDO1P14902 403 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 ME2P23368 584 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 NFKBIAP25963 317 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 METAP1P53582 386 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 MS4A2Q01362 244 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 TRAF3Q13114 568 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 GBX1Q14549 363 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 GRIN2CQ14957 1233 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 RPS6KA2Q15349 733 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 GSTA3Q16772 222 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 ZNF648Q5T619 568 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-201ENST00000315286 HENMT1Q5T8I9 393 aaKnown RBP18.03■□□□□ 0.48
CCDC43-201ENST00000315286 LAYNQ6UX15 382 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 RNF111Q6ZNA4 994 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 Q6ZSR9 355 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 GET4Q7L5D6 327 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-201ENST00000315286 SPATA19Q7Z5L4 167 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 TECPR1Q7Z6L1 1165 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 VRK3Q8IV63 474 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 SFTPA1Q8IWL2 248 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 HCAR2Q8TDS4 363 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 GDPD5Q8WTR4 605 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 FAM83CQ9BQN1 747 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 PFDN4Q9NQP4 134 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 ADA2Q9NZK5 511 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 ITM2BQ9Y287 266 aa18.03■□□□□ 0.48
CCDC43-201ENST00000315286 NR5A2O00482 541 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 NVLO15381 856 aaKnown RBP18.02■□□□□ 0.48
CCDC43-201ENST00000315286 SGTAO43765 313 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 OTCP00480 354 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 MMP12P39900 470 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 HTR6P50406 440 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 LIPIQ6XZB0 460 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 MILR1Q7Z6M3 343 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 KBTBD6Q86V97 674 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 TRAM1L1Q8N609 369 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 SLC45A3Q96JT2 553 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 ANKRD27Q96NW4 1050 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 OPTCQ9UBM4 332 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 MCM8Q9UJA3 840 aa18.02■□□□□ 0.48
CCDC43-201ENST00000315286 MATN4O95460 622 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 RPIAP49247 311 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 BOP1Q14137 746 aaKnown RBP18.02■□□□□ 0.47
CCDC43-201ENST00000315286 FNDC3BQ53EP0 1204 aaKnown RBP18.02■□□□□ 0.47
CCDC43-201ENST00000315286 NAIF1Q69YI7 327 aaPredicted RBP18.02■□□□□ 0.47
CCDC43-201ENST00000315286 IL27RAQ6UWB1 636 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 RETREG3Q86VR2 466 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 HBEGFQ99075 208 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 CCT7Q99832 543 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 IGFLR1Q9H665 355 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 NFKBIL1Q9UBC1 381 aaPredicted RBP18.02■□□□□ 0.47
CCDC43-201ENST00000315286 PDE10AQ9Y233 779 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 ANGPTL3Q9Y5C1 460 aa18.02■□□□□ 0.47
CCDC43-201ENST00000315286 EIF3FO00303 357 aaPredicted RBP18.01■□□□□ 0.47
CCDC43-201ENST00000315286 NUAK1O60285 661 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 CAPN3P20807 821 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 MUM1Q2TAK8 710 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 VPS26BQ4G0F5 336 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 C6orf136Q5SQH8 315 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 C9orf64Q5T6V5 341 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 ERAP2Q6P179 960 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 BEND7Q8N7W2 519 aaPredicted RBP18.01■□□□□ 0.47
CCDC43-201ENST00000315286 FAM156AQ8NDB6 213 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 UBTD2Q8WUN7 234 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 SKA2Q8WVK7 121 aaPredicted RBP18.01■□□□□ 0.47
CCDC43-201ENST00000315286 DNAJC9Q8WXX5 260 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 ZSCAN5AQ9BUG6 496 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 HPS4Q9NQG7 708 aa18.01■□□□□ 0.47
CCDC43-201ENST00000315286 RAD18Q9NS91 495 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms