RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.93
BDNF-201ENST00000314915 PTTG3PQ9NZH4 202 aa9.21□□□□□ -0.93
BDNF-201ENST00000314915 HSPBP1Q9NZL4 362 aa9.21□□□□□ -0.93
BDNF-201ENST00000314915 GAB2Q9UQC2 676 aa9.21□□□□□ -0.93
BDNF-201ENST00000314915 TCRBV3S1A0A5B6 114 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 DENND3A2RUS2 1198 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 PRDM1O75626 825 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 RASAL1O95294 804 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 C2P06681 752 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ADRB1P08588 477 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ITGB8P26012 769 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 HSPA2P54652 639 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 AAK1Q2M2I8 961 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 RFX4Q33E94 735 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ZSCAN18Q8TBC5 510 aaPredicted RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 UBASH3BQ8TF42 649 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 NR4A3Q92570 626 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 MTERF3Q96E29 417 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 NARS2Q96I59 477 aaKnown RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 TTLL2Q9BWV7 592 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 CRTAC1Q9NQ79 661 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 PRDM5Q9NQX1 630 aaPredicted RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 TRMT13Q9NUP7 481 aaKnown RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 LYARQ9NX58 379 aaKnown RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 ZNRF3Q9ULT6 936 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ING4Q9UNL4 249 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 MRC1P22897 1456 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 RPS10-NUDT3A0A1W2PQS6 291 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 TCRBV7S2A1N4TA0A589 114 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ANKDD1BA6NHY2 528 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 CCDC154A6NI56 674 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 WWP2O00308 870 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 TCAPO15273 167 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 XYLBO75191 536 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 TPOP07202 933 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ERVK-10P10266 1014 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 NFKB1P19838 968 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 MAPK4P31152 587 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 BRCC3P46736 316 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 CSTF1Q05048 431 aaKnown RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 MTMR1Q13613 665 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 NFYCQ13952 458 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 VEPH1Q14D04 833 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 TMEM31Q5JXX7 168 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 KCNT2Q6UVM3 1135 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ZNF574Q6ZN55 896 aaPredicted RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 ZNF557Q8N988 423 aaPredicted RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 APBA2Q99767 749 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 GSX2Q9BZM3 304 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 ACTR6Q9GZN1 396 aa9.21□□□□□ -0.94
BDNF-201ENST00000314915 MRPS30Q9NP92 439 aaKnown RBP9.21□□□□□ -0.94
BDNF-201ENST00000314915 H7C0S8 307 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 TRAF5O00463 557 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 DLGAP1O14490 977 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 ZMPSTE24O75844 475 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 INHBAP08476 426 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 ACSM4P0C7M7 580 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 SPI1P17947 270 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 RPS3P23396 243 aaKnown RBP eCLIP9.2□□□□□ -0.94
BDNF-201ENST00000314915 DDX6P26196 483 aaKnown RBP eCLIP9.2□□□□□ -0.94
BDNF-201ENST00000314915 IDH3AP50213 366 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 HSF2Q03933 536 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 TRILQ7L0X0 811 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 FAM217AQ8IXS0 508 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 LRRC17Q8N6Y2 441 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 KIAA0895Q8NCT3 520 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 RNF145Q96MT1 663 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 BEX2Q9BXY8 128 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 GDE1Q9NZC3 331 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 OPTCQ9UBM4 332 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 ZNF142P52746 1687 aaPredicted RBP9.2□□□□□ -0.94
BDNF-201ENST00000314915 MYH9P35579 1960 aaKnown RBP9.2□□□□□ -0.94
BDNF-201ENST00000314915 TEX13CA0A0J9YWL9 993 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 METTL15A6NJ78 407 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 PRKRAO75569 313 aaKnown RBP9.2□□□□□ -0.94
BDNF-201ENST00000314915 FAM155BO75949 473 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 IGKV5-2P06315 115 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 CKMT1AP12532 417 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 CRHBPP24387 322 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 FASP25445 335 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 CD6P30203 668 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 FUT2Q10981 343 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 TAF2Q6P1X5 1199 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 C11orf88Q6PI97 169 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 STRADAQ7RTN6 431 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 SLC16A13Q7RTY0 426 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 HS6ST3Q8IZP7 471 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 C8orf59Q8N0T1 100 aaPredicted RBP9.2□□□□□ -0.94
BDNF-201ENST00000314915 VWA5B2Q8N398 1253 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 EDARADDQ8WWZ3 215 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 LXNQ9BS40 222 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 ANKRD19PQ9H560 264 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 BLOC1S4Q9NUP1 217 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 MYEF2Q9P2K5 600 aaKnown RBP9.2□□□□□ -0.94
BDNF-201ENST00000314915 TRAPPC4Q9Y296 219 aa9.2□□□□□ -0.94
BDNF-201ENST00000314915 DNASE2O00115 360 aaPredicted RBP9.2□□□□□ -0.94
BDNF-201ENST00000314915 TMEM63AO94886 807 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms