RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 LRP8Q14114 963 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 CCDC85BQ15834 202 aaPredicted RBP18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 TRIB2Q92519 343 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 MAGED4Q96JG8 741 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 OSBPL6Q9BZF3 934 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 REEP1Q9H902 201 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 LRRC37AA6NMS7 1700 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 UBFD1O14562 309 aaKnown RBP18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 CLDN7O95471 211 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 FAM163BP0C2L3 166 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 SLC6A2P23975 617 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 GABRR2P28476 465 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 CHI3L1P36222 383 aaPredicted RBP18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 EIF2B2P49770 351 aaKnown RBP18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 USP41Q3LFD5 358 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 XKR6Q5GH73 641 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 FAM171BQ6P995 826 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 FIBCD1Q8N539 461 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 MTERF1Q99551 399 aaKnown RBP18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 ACAT2Q9BWD1 397 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 LDB2O43679 373 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 ESR1P03372 595 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 MAPK1P28482 360 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 FKBP1BP68106 108 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 OR52J3Q8NH60 311 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 ATP13A3Q9H7F0 1226 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 SELENONQ9NZV5 590 aa18.11■□□□□ 0.49
CDK5R1-201ENST00000313401 NRXN2Q9P2S2 1712 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 SERPINA1P01009 418 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 SBK3P0C264 359 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 SERPINB1P30740 379 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 HPCAP84074 193 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 PAGE2BQ5JRK9 111 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 CCM2LQ9NUG4 571 aaPredicted RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 SCHIP1Q9P0W5 487 aaPredicted RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 H3BNH8 94 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 KPNA3O00505 521 aaPredicted RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 PAPSS2O95340 614 aaPredicted RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 NADKO95544 446 aaPredicted RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 PTGER3P43115 390 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 UBE3AQ05086 875 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 CACNG1Q06432 222 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 TCEA2Q15560 299 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 MEP1AQ16819 746 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 CCNYL2Q5T2Q4 361 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 TRMT11Q7Z4G4 463 aaKnown RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 SMAD5Q99717 465 aaKnown RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 MRM3Q9HC36 420 aaKnown RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 PRSS51A0A1B0GVH4 220 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 K7ERQ8 282 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 CXCR6O00574 342 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 DBTP11182 482 aaKnown RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 CYP2A7P20853 494 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 RGRP47804 291 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 ACADVLP49748 655 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 ZNF284Q2VY69 593 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 TRIM60Q495X7 471 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 TXNDC8Q6A555 127 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 ZBTB2Q8N680 514 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 NSMCE3Q96MG7 304 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 RTP3Q9BQQ7 232 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 SLC13A4Q9UKG4 626 aa18.1■□□□□ 0.49
CDK5R1-201ENST00000313401 TMEM247A6NEH6 219 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 HHLA1C9JL84 531 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 MUSKO15146 869 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 CSKP41240 450 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 RANBP9Q96S59 729 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 ABCB10Q9NRK6 738 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 RNF11Q9Y3C5 154 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 ARIH1Q9Y4X5 557 aaPredicted RBP18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 LOC730098B7Z3J9 87 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 GLUD1P00367 558 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 FMO3P31513 532 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 ACLYP53396 1101 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 LARP4Q71RC2 724 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 GOLGA7Q7Z5G4 137 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 ERI1Q8IV48 349 aaKnown RBP18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 FAM110BQ8TC76 370 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 LMCD1Q9NZU5 365 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 SNX6Q9UNH7 406 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 CPQQ9Y646 472 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 ATAD5Q96QE3 1844 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 AXIN1O15169 862 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 SLC11A1P49279 550 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 SEMA3AQ14563 771 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 RGS21Q2M5E4 152 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 STX19Q8N4C7 294 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 KRTCAP2Q8N6L1 136 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 CORO1BQ9BR76 489 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 DERL2Q9GZP9 239 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 CFAP97Q9P2B7 532 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 TPRKBQ9Y3C4 175 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 KIAA0100Q14667 2235 aaKnown RBP18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 HOXA2O43364 376 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 FDXRP22570 491 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 HNF4AP41235 474 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 EGFLAMQ63HQ2 1017 aa18.09■□□□□ 0.49
CDK5R1-201ENST00000313401 DOK6Q6PKX4 331 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms