RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 MGME1Q9BQP7 344 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 CENPOQ9BU64 300 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 TM9SF3Q9HD45 589 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 TAS2R8Q9NYW2 309 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 WNT10BO00744 389 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SPAM1P38567 509 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ARL4DP49703 201 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 MBTD1Q05BQ5 628 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 CBLBQ13191 982 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 PWP1Q13610 501 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 PTPN20Q4JDL3 420 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF57Q68EA5 555 aaPredicted RBP8.71□□□□□ -1.02
COL6A5-202ENST00000312481 LAYNQ6UX15 382 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 FAM35AQ86V20 835 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 PIGXQ8TBF5 258 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 CCDC3Q9BQI4 270 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF780BQ9Y6R6 833 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 PI15O43692 258 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 TBX10O75333 385 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 OXSR1O95747 527 aaPredicted RBP8.71□□□□□ -1.02
COL6A5-202ENST00000312481 EFEMP1Q12805 493 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 GID4Q8IVV7 300 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 LRRC20Q8TCA0 184 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SLC38A4Q969I6 547 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
COL6A5-202ENST00000312481 FBXW11Q9UKB1 542 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 PTGES3LE9PB15 166 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 GRID2O43424 1007 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 GSTT2P0CG29 244 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 CKBP12277 381 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 OR1G1P47890 313 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ECT2LQ008S8 904 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 NPY5RQ15761 445 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SMG8Q8ND04 991 aaKnown RBP8.71□□□□□ -1.02
COL6A5-202ENST00000312481 WFIKKN2Q8TEU8 576 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 CPB2Q96IY4 423 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 COL21A1Q96P44 957 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 LMAN2LQ9H0V9 348 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SPATA7Q9P0W8 599 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SPATA2Q9UM82 520 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SLC12A8A0AV02 714 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 FAM155BO75949 473 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 EIF2DP41214 584 aaKnown RBP8.71□□□□□ -1.02
COL6A5-202ENST00000312481 SLC15A1P46059 708 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 NOVP48745 357 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ATP12AP54707 1039 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 WNT3AP56704 352 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF367Q7RTV3 350 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 PIGZQ86VD9 579 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 KIAA1191Q96A73 305 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 OR52B2Q96RD2 323 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 GPR88Q9GZN0 384 aa8.71□□□□□ -1.02
COL6A5-202ENST00000312481 ARL6IP5O75915 188 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FYNP06241 537 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 KCNE1P15382 129 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SLC25A3Q00325 362 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 C2orf80Q0P641 193 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 BMPR2Q13873 1038 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 Q3C1V9 767 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 OR2T5Q6IEZ7 315 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PTCHD4Q6ZW05 846 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 GSTCDQ8NEC7 633 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 OR2T29Q8NH02 315 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 AZIN2Q96A70 460 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 SMOC2Q9H3U7 446 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FLRT1Q9NZU1 646 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 EMC3Q9P0I2 261 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MATN4O95460 622 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ITGB5P18084 799 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ACSL1P33121 698 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ADAM15Q13444 863 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ACSBG2Q5FVE4 666 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 TPGS2Q68CL5 300 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 RASAL3Q86YV0 1011 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 NCSTNQ92542 709 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 CHFRQ96EP1 664 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MEAF6Q9HAF1 191 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 ARHGEF33A8MVX0 844 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 LRRTM2O43300 516 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 EEDO75530 441 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 LIPEQ05469 1076 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 BTKQ06187 659 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 KHDC1Q4VXA5 237 aaKnown RBP8.7□□□□□ -1.02
COL6A5-202ENST00000312481 GLYATQ6IB77 296 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 LRRN1Q6UXK5 716 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 MEIOBQ8N635 442 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 TAMM41Q96BW9 452 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 LRRC58Q96CX6 371 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 FOLH1BQ9HBA9 442 aa8.7□□□□□ -1.02
COL6A5-202ENST00000312481 PCDHB16Q9NRJ7 776 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms