RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SPATA22Q8NHS9 363 aa13□□□□□ -0.33
SNED1-201ENST00000310397 KLHL5Q96PQ7 755 aa13□□□□□ -0.33
SNED1-201ENST00000310397 HNRNPABQ99729 332 aaKnown RBP13□□□□□ -0.33
SNED1-201ENST00000310397 NECTIN3Q9NQS3 549 aa13□□□□□ -0.33
SNED1-201ENST00000310397 ACSS2Q9NR19 701 aa13□□□□□ -0.33
SNED1-201ENST00000310397 C1orf109Q9NX04 203 aa13□□□□□ -0.33
SNED1-201ENST00000310397 CHURC1-FNTBB4DL54 471 aa13□□□□□ -0.33
SNED1-201ENST00000310397 GABRDO14764 452 aa13□□□□□ -0.33
SNED1-201ENST00000310397 CCNB2O95067 398 aa13□□□□□ -0.33
SNED1-201ENST00000310397 NCK1P16333 377 aa13□□□□□ -0.33
SNED1-201ENST00000310397 ICAM3P32942 547 aa13□□□□□ -0.33
SNED1-201ENST00000310397 ALDH3A2P51648 485 aa13□□□□□ -0.33
SNED1-201ENST00000310397 PITPNAQ00169 270 aa13□□□□□ -0.33
SNED1-201ENST00000310397 LAPTM5Q13571 262 aa13□□□□□ -0.33
SNED1-201ENST00000310397 DRAXINQ8NBI3 349 aaPredicted RBP13□□□□□ -0.33
SNED1-201ENST00000310397 CRELD1Q96HD1 420 aa13□□□□□ -0.33
SNED1-201ENST00000310397 MCCC1Q96RQ3 725 aaPredicted RBP13□□□□□ -0.33
SNED1-201ENST00000310397 OXCT2Q9BYC2 517 aaPredicted RBP13□□□□□ -0.33
SNED1-201ENST00000310397 YES1P07947 543 aa13□□□□□ -0.33
SNED1-201ENST00000310397 SPAM1P38567 509 aa13□□□□□ -0.33
SNED1-201ENST00000310397 LARS2Q15031 903 aaKnown RBP13□□□□□ -0.33
SNED1-201ENST00000310397 LIX1Q8N485 282 aa13□□□□□ -0.33
SNED1-201ENST00000310397 NETO2Q8NC67 525 aa13□□□□□ -0.33
SNED1-201ENST00000310397 TRPV3Q8NET8 790 aa13□□□□□ -0.33
SNED1-201ENST00000310397 TNFAIP8L1Q8WVP5 186 aa13□□□□□ -0.33
SNED1-201ENST00000310397 AP2M1Q96CW1 435 aa13□□□□□ -0.33
SNED1-201ENST00000310397 MANSC4A6NHS7 340 aaPredicted RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 PDLIM1O00151 329 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 MT-CYBP00156 380 aaPredicted RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 HSPA7P48741 367 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 OR2B6P58173 313 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 RUNDC3AQ59EK9 446 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 UFD1Q92890 307 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 RNF19AQ9NV58 838 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 ELFN1P0C7U0 828 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 ANXA8P13928 327 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 DNAJA1P31689 397 aaKnown RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 SLC1A2P43004 574 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNED1-201ENST00000310397 NCKAP1Q9Y2A7 1128 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 C1RP00736 705 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 C8GP07360 202 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 ALDH4A1P30038 563 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 IL10RBQ08334 325 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 FBXO42Q6P3S6 717 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 RTL4Q6ZR62 310 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 SPPL2BQ8TCT7 592 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 COPS5Q92905 334 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 MAGEH1Q9H213 219 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 KIAA1522Q9P206 1035 aaPredicted RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 ASF1AQ9Y294 204 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 SLC35G4P0C7Q5 338 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 CCR10P46092 362 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 BEND5Q7L4P6 421 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 PDZD7Q9H5P4 517 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 MARCH7Q9H992 704 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 H3BNH8 94 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 GOT2P00505 430 aaKnown RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 GJB1P08034 283 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 S100GP29377 79 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 MYBPC3Q14896 1274 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 IQCCQ4KMZ1 466 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 IFI44LQ53G44 452 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 RDH12Q96NR8 316 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 PREBQ9HCU5 417 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 ABCB9Q9NP78 766 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 MRPL17Q9NRX2 175 aaKnown RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 INTS7Q9NVH2 962 aaKnown RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 SLC27A6Q9Y2P4 619 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 ITM2AO43736 263 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 CKMT2P17540 419 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 TUSC3Q13454 348 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 BTG3Q14201 252 aaPredicted RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 GFM1Q96RP9 751 aaKnown RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 GPR20Q99678 358 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 ZNF224Q9NZL3 707 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 SIRPGQ9P1W8 387 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 SEC14L4Q9UDX3 406 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 ERAL1O75616 437 aaKnown RBP12.99□□□□□ -0.33
SNED1-201ENST00000310397 PRR5P85299 388 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 C2orf80Q0P641 193 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 SLC38A4Q969I6 547 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 AZIN2Q96A70 460 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 FEM1CQ96JP0 617 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 PKP2Q99959 881 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 DCSTAMPQ9H295 470 aa12.99□□□□□ -0.33
SNED1-201ENST00000310397 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
SNED1-201ENST00000310397 DNAJB5O75953 348 aa12.98□□□□□ -0.33
SNED1-201ENST00000310397 ASGR1P07306 291 aa12.98□□□□□ -0.33
SNED1-201ENST00000310397 ANXA4P09525 319 aaPredicted RBP12.98□□□□□ -0.33
SNED1-201ENST00000310397 GNA12Q03113 381 aa12.98□□□□□ -0.33
SNED1-201ENST00000310397 CHST15Q7LFX5 561 aaPredicted RBP12.98□□□□□ -0.33
SNED1-201ENST00000310397 STON2Q8WXE9 905 aa12.98□□□□□ -0.33
SNED1-201ENST00000310397 FCRL4Q96PJ5 515 aa12.98□□□□□ -0.33
SNED1-201ENST00000310397 GLIS2Q9BZE0 524 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms