RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 RMDN2Q96LZ7 410 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 RAB33BQ9H082 229 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 LRRC40Q9H9A6 602 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 ARNT2Q9HBZ2 717 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 PIH1D1Q9NWS0 290 aaKnown RBP19.07■□□□□ 0.64
LIME1-201ENST00000309546 IMPACTQ9P2X3 320 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 ACSL5Q9ULC5 683 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 RPS6KL1Q9Y6S9 549 aa19.07■□□□□ 0.64
LIME1-201ENST00000309546 IGHV5-51A0A0C4DH38 117 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 TCRBV7S2A1N4TA0A589 114 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 CCDC78A2IDD5 438 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 KLHL33A6NCF5 533 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 AGAP14A8MT82 685 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 SGTAO43765 313 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 ITGB6P18564 788 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 NELFEP18615 380 aaKnown RBP19.06■□□□□ 0.64
LIME1-201ENST00000309546 CDC25BP30305 580 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 DLSTP36957 453 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 PRLHRP49683 370 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 ARL4DP49703 201 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 CDKN1CP49918 316 aaPredicted RBP19.06■□□□□ 0.64
LIME1-201ENST00000309546 POLE2P56282 527 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 CDC20Q12834 499 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 TUBB3Q13509 450 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 MAP7Q14244 749 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 KRT33BQ14525 404 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 KCNAB1Q14722 419 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 KCTD11Q693B1 232 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 C16orf46Q6P387 395 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 CYB5D1Q6P9G0 228 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 C6orf15Q6UXA7 325 aaPredicted RBP19.06■□□□□ 0.64
LIME1-201ENST00000309546 TAS2R42Q7RTR8 314 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 PPP1R3BQ86XI6 285 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 KLHDC8BQ8IXV7 354 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 HM13Q8TCT9 377 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 UBXN4Q92575 508 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 LINC00615Q96LM1 132 aaPredicted RBP19.06■□□□□ 0.64
LIME1-201ENST00000309546 MAP3K3Q99759 626 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 STARD5Q9NSY2 213 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 HRASLS2Q9NWW9 162 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 SLC24A2Q9UI40 661 aa19.06■□□□□ 0.64
LIME1-201ENST00000309546 MRPS18BQ9Y676 258 aaKnown RBP19.06■□□□□ 0.64
LIME1-201ENST00000309546 HELZ2Q9BYK8 2649 aaKnown RBP19.06■□□□□ 0.64
LIME1-201ENST00000309546 UBA6A0AVT1 1052 aaPredicted RBP19.05■□□□□ 0.64
LIME1-201ENST00000309546 OR5K3A6NET4 321 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 PRSS56P0CW18 603 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 FGF5P12034 268 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 ATP1B2P14415 290 aaPredicted RBP19.05■□□□□ 0.64
LIME1-201ENST00000309546 CCR10P46092 362 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 ARCN1P48444 511 aaKnown RBP19.05■□□□□ 0.64
LIME1-201ENST00000309546 ATP1A1-AS1Q5TC04 95 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 SEL1L2Q5TEA6 688 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 ARMC6Q6NXE6 501 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 SLC35B2Q8TB61 432 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 HEXDCQ8WVB3 486 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 ATG4AQ8WYN0 398 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 HES6Q96HZ4 224 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 SLC41A2Q96JW4 573 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 CATSPER2Q96P56 530 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 PDE7BQ9NP56 450 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 GEMIN8Q9NWZ8 242 aaKnown RBP19.05■□□□□ 0.64
LIME1-201ENST00000309546 ZDHHC3Q9NYG2 299 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 CROTQ9UKG9 612 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 RARRES3Q9UL19 164 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 PIKFYVEQ9Y2I7 2098 aa19.05■□□□□ 0.64
LIME1-201ENST00000309546 OR6C74A6NCV1 312 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 TLCD2A6NGC4 264 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 GOLGA6L6A8MZA4 724 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 SPAG6O75602 509 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 AP2A1O95782 977 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 EBLN1P0CF75 366 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 FOLR1P15328 257 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 TCN2P20062 427 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 ACRV1P26436 265 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 OAS2P29728 719 aaKnown RBP19.04■□□□□ 0.64
LIME1-201ENST00000309546 MC1RQ01726 317 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 GPR33Q49SQ1 333 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 CERS6Q6ZMG9 384 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 SERPINA9Q86WD7 417 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 ALS2CR12Q96Q35 445 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 C19orf43Q9BQ61 176 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 TRIM4Q9C037 500 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 SLC25A18Q9H1K4 315 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 ADNPQ9H2P0 1102 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 KIR3DX1Q9H7L2 352 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 COG4Q9H9E3 785 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 NLE1Q9NVX2 485 aaPredicted RBP19.04■□□□□ 0.64
LIME1-201ENST00000309546 COLEC10Q9Y6Z7 277 aa19.04■□□□□ 0.64
LIME1-201ENST00000309546 PSMD3O43242 534 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 KATNA1O75449 491 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 TIAF1O95411 115 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 F8A1P23610 371 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 KCNAB2Q13303 367 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 DEFB109BQ30KR1 87 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.03■□□□□ 0.64
LIME1-201ENST00000309546 CAPRIN2Q6IMN6 1127 aaKnown RBP19.03■□□□□ 0.64
LIME1-201ENST00000309546 CD180Q99467 661 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 CCM2Q9BSQ5 444 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 VPS37BQ9H9H4 285 aa19.03■□□□□ 0.64
LIME1-201ENST00000309546 GUCA1BQ9UMX6 200 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms