RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 C2CD4AQ8NCU7 369 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 OSBPL10Q9BXB5 764 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TM6SF2Q9BZW4 377 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 RAB23Q9ULC3 237 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ST14Q9Y5Y6 855 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 CYP7B1O75881 506 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ENO2P09104 434 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 EPORP19235 508 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 HOXD10P28358 340 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 CACNG1Q06432 222 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 DNASE1L3Q13609 305 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 PPP1R3AQ16821 1122 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TREML2Q5T2D2 321 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 HECTD3Q5T447 861 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ZNF671Q8TAW3 534 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 C12orf42Q96LP6 360 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TMEM74Q96NL1 305 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 GDAP2Q9NXN4 497 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 KCTD5Q9NXV2 234 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 CCDC59Q9P031 241 aaKnown RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 SLC9A8Q9Y2E8 581 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 KCNE2Q9Y6J6 123 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ANKDD1BA6NHY2 528 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 FADS2P1A8MWK0 482 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 CYP2A6P11509 494 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 HDCP19113 662 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 MYBPC1Q00872 1141 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 UBE2R2Q712K3 238 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 CHST15Q7LFX5 561 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 C9orf43Q8TAL5 461 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 BBS4Q96RK4 519 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 PDGFDQ9GZP0 370 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 ATP13A3Q9H7F0 1226 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ST3GAL5Q9UNP4 418 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 EDIL3O43854 480 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 SORBS2O94875 1100 aaKnown RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 CTPS1P17812 591 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 GLDCP23378 1020 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 VARSP26640 1264 aaKnown RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 DNAJA1P31689 397 aaKnown RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 PTGER3P43115 390 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 LCN1P1Q5VSP4 162 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 SDHAF4Q5VUM1 108 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 SULT1C3Q6IMI6 304 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TAPT1Q6NXT6 567 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TMEM53Q6P2H8 277 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 TUBA3EQ6PEY2 450 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ANKRD46Q86W74 232 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 OR4A15Q8NGL6 344 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 CLP1Q92989 425 aaKnown RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 PIWIL1Q96J94 861 aaKnown RBP19.05■□□□□ 0.64
USP48-201ENST00000308271 YME1L1Q96TA2 773 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 ITPAQ9BY32 194 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 MINDY3Q9H8M7 445 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 MEAF6Q9HAF1 191 aa19.05■□□□□ 0.64
USP48-201ENST00000308271 MAGEB3O15480 346 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 TLR5O60602 858 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 AP2A2O94973 939 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 UFM1P61960 85 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 TXNL4AP83876 142 aaKnown RBP19.04■□□□□ 0.64
USP48-201ENST00000308271 ZNF678Q5SXM1 525 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 MAPK15Q8TD08 544 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 MRM3Q9HC36 420 aaKnown RBP19.04■□□□□ 0.64
USP48-201ENST00000308271 RAI2Q9Y5P3 530 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 SSNA1O43805 119 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 SERPINB7O75635 380 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 EPHB3P54753 998 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 FBXO43Q4G163 708 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 GPR153Q6NV75 609 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 NEK5Q6P3R8 708 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 SLC2A7Q6PXP3 512 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 RNF180Q86T96 592 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 PSMG2Q969U7 264 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 ZFP42Q96MM3 310 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 ACBD6Q9BR61 282 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 INMTO95050 263 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 LRG1P02750 347 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 SLC35E2BP0CK96 405 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 NOS3P29474 1203 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 SLC10A2Q12908 348 aaPredicted RBP19.04■□□□□ 0.64
USP48-201ENST00000308271 SLC15A3Q8IY34 581 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 MINDY1Q8N5J2 469 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 TMEM174Q8WUU8 243 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 DNAJC11Q9NVH1 559 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 MKLN1Q9UL63 735 aa19.04■□□□□ 0.64
USP48-201ENST00000308271 MRPS7Q9Y2R9 242 aaKnown RBP19.04■□□□□ 0.64
USP48-201ENST00000308271 FOXD2O60548 495 aaPredicted RBP19.03■□□□□ 0.64
USP48-201ENST00000308271 ECI2O75521 394 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 TFAP2AP05549 437 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 HUNKP57058 714 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 NFATC3Q12968 1075 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 TEAD4Q15561 434 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 DUSP28Q4G0W2 176 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 C6orf141Q5SZD1 244 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 ERAP2Q6P179 960 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 NAPRTQ6XQN6 538 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 PPP1R13LQ8WUF5 828 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 DMRTB1Q96MA1 342 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms